RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TSPAN9O75954 239 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 TOMM70O94826 608 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 BCL10O95999 233 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 ARSEP51690 589 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 RPS18P62269 152 aaKnown RBP4.7□□□□□ -1.66
CCDC39-206ENST00000489868 DCAF10Q5QP82 559 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 LINGO4Q6UY18 593 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 WDSUB1Q8N9V3 476 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF383Q8NA42 475 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 MTERF3Q96E29 417 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 LRR1Q96L50 414 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 MYADMQ96S97 322 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 RTP3Q9BQQ7 232 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 TRAF4Q9BUZ4 470 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-206ENST00000489868 MXD3Q9BW11 206 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 UBA5Q9GZZ9 404 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 OSGEPL1Q9H4B0 414 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 A4GALTQ9NPC4 353 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 TUBE1Q9UJT0 475 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 KCNJ14Q9UNX9 436 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 DISP3Q9P2K9 1392 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 MED19A0JLT2 244 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-206ENST00000489868 A8MV72 311 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-206ENST00000489868 CAVIN2O95810 425 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 CGAP01215 116 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 EIF2DP41214 584 aaKnown RBP4.69□□□□□ -1.66
CCDC39-206ENST00000489868 CLNS1AP54105 237 aaKnown RBP4.69□□□□□ -1.66
CCDC39-206ENST00000489868 CDK3Q00526 305 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 LGALS3BPQ08380 585 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 DMPKQ09013 629 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 SH2D5Q6ZV89 423 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 KRTAP7-1Q8IUC3 87 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 DNAJC22Q8N4W6 341 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 OR5M8Q8NGP6 311 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 FGFBP3Q8TAT2 258 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 RNF128Q8TEB7 428 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 ZHX1Q9UKY1 873 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-206ENST00000489868 SLC7A7Q9UM01 511 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 STK36Q9NRP7 1315 aa4.69□□□□□ -1.66
CCDC39-206ENST00000489868 GPR75-ASB3A0A0A6YYF3 556 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 A0A0G2JLW4 131 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 A0A1W2PRB8 838 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 PRR32B1ATL7 298 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF197O14709 1029 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 CLIC2O15247 247 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 VPREB1P12018 145 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 CEACAM1P13688 526 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 ITGA3P26006 1051 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 HSD17B4P51659 736 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 STK4Q13043 487 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 P2RY6Q15077 328 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 MDH1BQ5I0G3 518 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-206ENST00000489868 TMEM211Q6ICI0 200 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 TAGAPQ8N103 731 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 OR1J1Q8NGS3 322 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 OR13J1Q8NGT2 312 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF622Q969S3 477 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC39-206ENST00000489868 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 NEK1Q96PY6 1258 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 FNDC11Q9BVV2 318 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 MOV10L1Q9BXT6 1211 aaKnown RBP4.68□□□□□ -1.66
CCDC39-206ENST00000489868 GFRA4Q9GZZ7 299 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 TBC1D17Q9HA65 648 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF71Q9NQZ8 489 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-206ENST00000489868 PSD3Q9NYI0 1048 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 MTUS1Q9ULD2 1270 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 KCNK7Q9Y2U2 307 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 RABGAP1Q9Y3P9 1069 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 PYGO1Q9Y3Y4 419 aa4.68□□□□□ -1.66
CCDC39-206ENST00000489868 HYKKA2RU49 373 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ANKUB1A6NFN9 424 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 PRAMEF11O60813 436 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 MED24O75448 989 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 BEST1O76090 585 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 CLPTM1O96005 669 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 CEACAM8P31997 349 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 STAT2P52630 851 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 TPD52P55327 224 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 CX3CL1P78423 397 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 NTRK2Q16620 822 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 FFAR4Q5NUL3 377 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF554Q86TJ5 538 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF595Q8IYB9 648 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 GUF1Q8N442 669 aaKnown RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 AFAP1Q8N556 730 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 TRIML1Q8N9V2 468 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ADAD2Q8NCV1 583 aaKnown RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 LPGAT1Q92604 370 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 RSRC1Q96IZ7 334 aaKnown RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ABHD1Q96SE0 405 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 TEX12Q9BXU0 123 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 BARHL1Q9BZE3 327 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 MMP27Q9H306 513 aa4.67□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-206ENST00000489868 C2orf42Q9NWW7 574 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms