RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 DTX1Q86Y01 620 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 TMEM126BQ8IUX1 230 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PIANPQ8IYJ0 282 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 CARFQ8N187 725 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 MPP5Q8N3R9 675 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 RAB42Q8N4Z0 105 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 BMPERQ8N8U9 685 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 TFGQ92734 400 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PEX13Q92968 403 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 NKD1Q969G9 470 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 FOPNLQ96NB1 174 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PANX3Q96QZ0 392 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 MAP3K3Q99759 626 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 AP1M1Q9BXS5 423 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 APMAPQ9HDC9 416 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 CHRAC1Q9NRG0 131 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 TRMT1Q9NXH9 659 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 SLC2A6Q9UGQ3 507 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 POLG2Q9UHN1 485 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 GNPTGQ9UJJ9 305 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ATMQ13315 3056 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 KPNA5O15131 536 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 KATNA1O75449 491 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 EBLN1P0CF75 366 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 PRKAR1AP10644 381 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 ITGB6P18564 788 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 TPSB2P20231 275 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 MGAT1P26572 445 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 FOXN2P32314 431 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 SHMT2P34897 504 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CCR10P46092 362 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 TUBB4BP68371 445 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 ABHD18Q0P651 414 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 HSPA14Q0VDF9 509 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 MSLNQ13421 630 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 THOC5Q13769 683 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 TUBB2AQ13885 445 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 TPSAB1Q15661 275 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CAPRIN2Q6IMN6 1127 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 C16orf46Q6P387 395 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 BORAQ6PGQ7 559 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CCDC137Q6PK04 289 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 AMIGO1Q86WK6 493 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 LRRC6Q86X45 466 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 UNC5BQ8IZJ1 945 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 LILRA3Q8N6C8 439 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 GLIS1Q8NBF1 620 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 GALNT6Q8NCL4 622 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 PHC3Q8NDX5 983 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 OR52E1Q8NGJ3 308 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 OR13J1Q8NGT2 312 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 OR8K5Q8NH50 307 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CFAP61Q8NHU2 1237 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 GABPB2Q8TAK5 448 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 SNRNP27Q8WVK2 155 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 ASZ1Q8WWH4 475 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 KLHL6Q8WZ60 621 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 EXTL1Q92935 676 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 MED8Q96G25 268 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 WBP1Q96G27 269 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CATSPER2Q96P56 530 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 TUBB2BQ9BVA1 445 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 OR52A5Q9H2C5 316 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 CCDC68Q9H2F9 335 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 XAB2Q9HCS7 855 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 FGF21Q9NSA1 209 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 SIDT1Q9NXL6 827 aaKnown RBP8.88□□□□□ -0.99
HDAC6-232ENST00000489053 KCND3Q9UK17 655 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 PADI1Q9ULC6 663 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 MRFAP1Q9Y605 127 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 RPS6KL1Q9Y6S9 549 aa8.88□□□□□ -0.99
HDAC6-232ENST00000489053 KIF26BQ2KJY2 2108 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 IGHV5-51A0A0C4DH38 117 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PIPSLA2A3N6 862 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 CTAGE9A4FU28 777 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 E5RI56 91 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 H3BMM5 538 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PRMT5O14744 637 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SGTAO43765 313 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 OR1I1O60431 355 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 CPNE3O75131 537 aaKnown RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SPAG6O75602 509 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SCRG1O75711 98 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PRB1P04280 392 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 KLK3P07288 261 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 FGF5P12034 268 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 TCN2P20062 427 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 CYP2A7P20853 494 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PDHA2P29803 388 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 DLSTP36957 453 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 STAT5AP42229 794 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 EIF3BP55884 814 aaKnown RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PPP1CAP62136 330 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms