RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 NAPRTQ6XQN6 538 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 TBC1D21Q8IYX1 336 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 SIDT2Q8NBJ9 832 aaKnown RBP15.58■□□□□ 0.08
HDAC7-224ENST00000488927 OR10G6Q8NH81 332 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 CD200R1Q8TD46 325 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 SKA2Q8WVK7 121 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-224ENST00000488927 ADAMTS14Q8WXS8 1223 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 FERD3LQ96RJ6 166 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 GPR21Q99679 349 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 DPYSL5Q9BPU6 564 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 TXLNGYQ9BZA5 131 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 TRIT1Q9H3H1 467 aaKnown RBP15.58■□□□□ 0.08
HDAC7-224ENST00000488927 KIR3DX1Q9H7L2 352 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 POLG2Q9UHN1 485 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 ASF1AQ9Y294 204 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 MED16Q9Y2X0 877 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 IKBKGQ9Y6K9 419 aa15.58■□□□□ 0.08
HDAC7-224ENST00000488927 ARHGEF17Q96PE2 2063 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-224ENST00000488927 PIKFYVEQ9Y2I7 2098 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 FAM95CA0A1B0GW59 222 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 RIPK2O43353 540 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 OPA1O60313 960 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 FDXRP22570 491 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 LIMK2P53671 638 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 VSNL1P62760 191 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 RBM20Q5T481 1227 aaKnown RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 EMBQ6PCB8 327 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 TTC23LQ6PF05 361 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 KLHL35Q6PF15 583 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 GSPT2Q8IYD1 628 aaKnown RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 GALNT15Q8N3T1 639 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 Q8N9G6 341 aaPredicted RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 ACVR1CQ8NER5 493 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 OR5K2Q8NHB8 316 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 MAGEC3Q8TD91 643 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 FAM136AQ96C01 138 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 TSPAN17Q96FV3 270 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 ATXN7L3BQ96GX2 97 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 AHCYL2Q96HN2 611 aaKnown RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 ELMO2Q96JJ3 720 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 LRRN3Q9H3W5 708 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 POPDC3Q9HBV1 291 aa15.57■□□□□ 0.08
HDAC7-224ENST00000488927 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 CFAP20Q9Y6A4 193 aaKnown RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 V9GYY5 206 aaPredicted RBP15.57■□□□□ 0.08
HDAC7-224ENST00000488927 GOLGA4Q13439 2230 aaKnown RBP15.56■□□□□ 0.08
HDAC7-224ENST00000488927 IGHV1OR21-1A0A087WYE8 117 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 NTN3O00634 580 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-224ENST00000488927 DUX1O43812 170 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 PIAS1O75925 651 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 RPLP0P05388 317 aaKnown RBP15.56■□□□□ 0.08
HDAC7-224ENST00000488927 MPC1LP0DKB6 136 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 CCNFP41002 786 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 ABCG1P45844 678 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 CDKN2DP55273 166 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 SQSTM1Q13501 440 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 SPIDRQ14159 915 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 GPR18Q14330 331 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 PLCL1Q15111 1095 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 DHRS13Q6UX07 377 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 TAOK1Q7L7X3 1001 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 TMPRSS12Q86WS5 348 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 VRK3Q8IV63 474 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 CACTIN-AS1Q8N1I8 211 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 GIMAP7Q8NHV1 300 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 GFM1Q96RP9 751 aaKnown RBP15.56■□□□□ 0.08
HDAC7-224ENST00000488927 GPR22Q99680 433 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 CCDC77Q9BR77 488 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 SYTL2Q9HCH5 934 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 GALPQ9UBC7 116 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 SLC24A2Q9UI40 661 aa15.56■□□□□ 0.08
HDAC7-224ENST00000488927 FAM221BA6H8Z2 402 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 B4GAT1O43505 415 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 UBXN7O94888 489 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 MATN4O95460 622 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 CPNE6O95741 557 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 INHBAP08476 426 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 SERPINB9P50453 376 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 OR1D5P58170 312 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 IL2P60568 153 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 CCL7P80098 99 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 INSM1Q01101 510 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 ABRQ12979 859 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 ACSBG2Q5FVE4 666 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 N4BP2L1Q5TBK1 243 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 DUS1LQ6P1R4 473 aaKnown RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 RBM44Q6ZP01 1051 aaKnown RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 DCUN1D3Q8IWE4 304 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 SLC44A1Q8WWI5 657 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 GRAMD1AQ96CP6 724 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 PARD6BQ9BYG5 372 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 TFB2MQ9H5Q4 396 aaKnown RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 SYNDIG1Q9H7V2 258 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 FETUBQ9UGM5 382 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
HDAC7-224ENST00000488927 CNOT1A5YKK6 2376 aaKnown RBP15.55■□□□□ 0.08
HDAC7-224ENST00000488927 EXOC1LA0A1B0GW35 172 aa15.54■□□□□ 0.08
HDAC7-224ENST00000488927 A0A1W2PQM1 296 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms