RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 KCNN4O15554 427 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 VPS4BO75351 444 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 RBP3P10745 1247 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 ATP1B2P14415 290 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-231ENST00000488905 HADHAP40939 763 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 NADK2Q4G0N4 442 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 ZNF789Q5FWF6 425 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 PLEKHS1Q5SXH7 462 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 LCN10Q6JVE6 187 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 FAM198BQ6UWH4 519 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 OR1L3Q8NH93 324 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 HEXDCQ8WVB3 486 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 CLIP3Q96DZ5 547 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 TBL1YQ9BQ87 522 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 PITPNM3Q9BZ71 974 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 OR52A5Q9H2C5 316 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 FAM96AQ9H5X1 160 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 SYTL2Q9HCH5 934 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 VPS4AQ9UN37 437 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 EFR3BQ9Y2G0 817 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 PCDHA13Q9Y5I0 950 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 PCM1Q15154 2024 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 UNC79Q9P2D8 2635 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 IGLV3-16A0A075B6K0 115 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CCDC66A2RUB6 948 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 IFRD1O00458 451 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 BTN3A1O00481 513 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CCL22O00626 93 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 SORBS2O94875 1100 aaKnown RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 ST6GAL1P15907 406 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CYP2A7P20853 494 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CTNNA2P26232 953 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 PTPN7P35236 360 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 PREPP48147 710 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CCL11P51671 97 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 EIF3EP60228 445 aaKnown RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 ZNF658BQ4V348 819 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 FAM69BQ5VUD6 431 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 DENND5AQ6IQ26 1287 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 SYTL1Q8IYJ3 562 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 GALNT11Q8NCW6 608 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 CCDC110Q8TBZ0 833 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 SPATA13Q96N96 652 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 PPP1R2P1Q96PQ5 205 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 FERD3LQ96RJ6 166 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 FAM118BQ9BPY3 351 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 OSBPL8Q9BZF1 889 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 ACTR5Q9H9F9 607 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 VPS37BQ9H9H4 285 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 LUC7LQ9NQ29 371 aaKnown RBP17.88■□□□□ 0.45
HDAC6-231ENST00000488905 PCMTD2Q9NV79 361 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 TCFL5Q9UL49 500 aa17.88■□□□□ 0.45
HDAC6-231ENST00000488905 TRBV5-4A0A0C4DH59 114 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 BTN3A3O00478 584 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 LDB2O43679 373 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 CEACAM4O75871 244 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 TMEM63AO94886 807 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 CAPN1P07384 714 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 ACRV1P26436 265 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 PRDX3P30048 256 aaKnown RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 MC4RP32245 332 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 LMAN1P49257 510 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 SPA17Q15506 151 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 SKOR2Q2VWA4 1001 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 GPR33Q49SQ1 333 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 DARS2Q6PI48 645 aaKnown RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 CCDC170Q8IYT3 715 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 OR52E1Q8NGJ3 308 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 DNAJC1Q96KC8 554 aaKnown RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 NRTNQ99748 197 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 HGH1Q9BTY7 390 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 TFB2MQ9H5Q4 396 aaKnown RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 ARNT2Q9HBZ2 717 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 ZDHHC3Q9NYG2 299 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-231ENST00000488905 ZNF451Q9Y4E5 1061 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 PCDHGB7Q9Y5F8 929 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
HDAC6-231ENST00000488905 GNLYP22749 145 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 CYLC1P35663 651 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-231ENST00000488905 CD151P48509 253 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 CDKN1CP49918 316 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-231ENST00000488905 VAV2P52735 878 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 SPARCL1Q14515 664 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 SARM1Q6SZW1 724 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 MICALCLQ6ZW33 695 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 KLHDC8BQ8IXV7 354 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 TRAPPC9Q96Q05 1148 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 MVB12BQ9H7P6 319 aa17.86■□□□□ 0.45
HDAC6-231ENST00000488905 C2orf74A8MZ97 194 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 E7EQ34 232 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 H7C0S8 307 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 MAP3K7O43318 606 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 PRSS56P0CW18 603 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 PVRP15151 417 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 PDHA2P29803 388 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 ITGA1P56199 1179 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 NOTCH2Q04721 2471 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms