RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MICALCLQ6ZW33 695 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 RAB44Q7Z6P3 723 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TAF8Q7Z7C8 310 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 ISCA2Q86U28 154 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 SPATS2Q86XZ4 545 aaKnown RBP10.8□□□□□ -0.68
HDLBP-242ENST00000488013 GPSM1Q86YR5 675 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 SLC22A9Q8IVM8 553 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TRIM42Q8IWZ5 723 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TBC1D21Q8IYX1 336 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TCAIMQ8N3R3 496 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 CCDC63Q8NA47 563 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TCP10LQ8TDR4 215 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 KCTD4Q8WVF5 259 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 ANKRD49Q8WVL7 239 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 ATL1Q8WXF7 558 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 NXNL1Q96CM4 212 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 GPR78Q96P69 363 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 DUSP23Q9BVJ7 150 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TMEM168Q9H0V1 697 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 OR52A5Q9H2C5 316 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 TRIT1Q9H3H1 467 aaKnown RBP10.8□□□□□ -0.68
HDLBP-242ENST00000488013 STN1Q9H668 368 aaKnown RBP10.8□□□□□ -0.68
HDLBP-242ENST00000488013 CAPN10Q9HC96 672 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 GALPQ9UBC7 116 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 GULP1Q9UBP9 304 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 SLC23A2Q9UGH3 650 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 RNF112Q9ULX5 631 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 CDYLQ9Y232 598 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 ASF1AQ9Y294 204 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 DNAJC16Q9Y2G8 782 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 PRKAB1Q9Y478 270 aa10.8□□□□□ -0.68
HDLBP-242ENST00000488013 ARHGAP33O14559 1287 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 BIRC5O15392 142 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 AQP9O43315 295 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PLIN3O60664 434 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SNX2O60749 519 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 LRP3O75074 770 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 H2AFYO75367 372 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PSIP1O75475 530 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SNUPNO95149 360 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ANXA6P08133 673 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ALPPL2P10696 532 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 F3P13726 295 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ACADLP28330 430 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 MPLP40238 635 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PREPP48147 710 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ATXN3P54252 364 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 IL9RQ01113 521 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 CAMK2BQ13554 666 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 KRT33BQ14525 404 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SUZ12Q15022 739 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PLA2G4EQ3MJ16 856 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 TRIM61Q5EBN2 209 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PRRT3Q5FWE3 981 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 HHATQ5VTY9 493 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 KDM7AQ6ZMT4 941 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 PIWIL4Q7Z3Z4 852 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 DCUN1D3Q8IWE4 304 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 TFGQ92734 400 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 RAD51AP1Q96B01 352 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SH3KBP1Q96B97 665 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 CCDC138Q96M89 665 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SLC30A3Q99726 388 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SELENOSQ9BQE4 189 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 RAB11FIP5Q9BXF6 653 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 ALG9Q9H6U8 611 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 TMEM74BQ9NUR3 256 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 EVA1BQ9NVM1 165 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 NUDT4Q9NZJ9 180 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 NCKIPSDQ9NZQ3 722 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 TAAR2Q9P1P5 351 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 XPR1Q9UBH6 696 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 LNPEPQ9UIQ6 1025 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 KCNK6Q9Y257 313 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 OARD1Q9Y530 152 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 TNPO3Q9Y5L0 923 aaKnown RBP10.79□□□□□ -0.68
HDLBP-242ENST00000488013 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
HDLBP-242ENST00000488013 A0A1B0GTQ1 180 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ZW10O43264 779 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 SPAG7O75391 227 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 PIAS2O75928 621 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 IPO13O94829 963 aaKnown RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ANXA5P08758 320 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 MYL2P10916 166 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 CPA3P15088 417 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ATP5F1P24539 256 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 RPA3P35244 121 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 RPIAP49247 311 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 CCT8P50990 548 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 NFKB2Q00653 900 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 IRF9Q00978 393 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ABRQ12979 859 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 GRIK2Q13002 908 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ARHGAP19Q14CB8 494 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 INAVAQ3KP66 663 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 TECRLQ5HYJ1 363 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 SULT1C3Q6IMI6 304 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 IYDQ6PHW0 289 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms