RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TYRO3Q06418 890 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ADCY2Q08462 1091 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ITGA9Q13797 1035 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 NR1I3Q14994 352 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 PDK1Q15118 436 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ZIC1Q15915 447 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 MRPL14Q6P1L8 145 aaKnown RBP14.86□□□□□ -0.03
MCF2L-228ENST00000487354 VSIG1Q86XK7 387 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ADGRF3Q8IZF5 1079 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 SLC25A41Q8N5S1 370 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 CLEC1AQ8NC01 280 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ACVR1CQ8NER5 493 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 OR2Y1Q8NGV0 311 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 FER1L6-AS2Q96M78 137 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 IP6K3Q96PC2 410 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 OR52A5Q9H2C5 316 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 TMEM63CQ9P1W3 806 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 PADI2Q9Y2J8 665 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 PTRH2Q9Y3E5 179 aaKnown RBP14.86□□□□□ -0.03
MCF2L-228ENST00000487354 BZW2Q9Y6E2 419 aaKnown RBP14.86□□□□□ -0.03
MCF2L-228ENST00000487354 MYO7BQ6PIF6 2116 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 A0A1W2PQJ5 194 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 MATN2O00339 956 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 APOL1O14791 398 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-228ENST00000487354 PRAMEF1O95521 474 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 SERPING1P05155 500 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 ALPPP05187 535 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 POLBP06746 335 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 MSH3P20585 1137 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 NDUFS1P28331 727 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 AKT1P31749 480 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 GLRBP48167 497 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 PRKAA1Q13131 559 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 ELOAQ14241 798 aaKnown RBP14.85□□□□□ -0.03
MCF2L-228ENST00000487354 SLC1A5Q15758 541 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 HIF1AQ16665 826 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 LONRF2Q1L5Z9 754 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 DEFB110Q30KQ9 67 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 ZFYVE27Q5T4F4 411 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 C1orf189Q5VU69 101 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 RHBDD2Q6NTF9 364 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 IGFL2Q6UWQ7 119 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 MICALCLQ6ZW33 695 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 GLT6D1Q7Z4J2 308 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 FLVCR1-AS1Q8TAF5 88 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 BLOC1S5Q8TDH9 187 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 WDR77Q9BQA1 342 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-228ENST00000487354 BPIFA3Q9BQP9 254 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 GORASP1Q9BQQ3 440 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 SRMSQ9H3Y6 488 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 SLC22A11Q9NSA0 550 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
MCF2L-228ENST00000487354 CTTNBP2NLQ9P2B4 639 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 UVRAGQ9P2Y5 699 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 FAM153AQ9UHL3 310 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 CDYLQ9Y232 598 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 OSGIN2Q9Y236 505 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 SETD2Q9BYW2 2564 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-228ENST00000487354 PKDREJQ9NTG1 2253 aa14.85□□□□□ -0.03
MCF2L-228ENST00000487354 AGAP14A8MT82 685 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 ALOX12BO75342 701 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 EPOP01588 193 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 ITGAXP20702 1163 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 AGXTP21549 392 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 FOLR3P41439 243 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 GCGRP47871 477 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 PRLHRP49683 370 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 MLIPQ5VWP3 458 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 CCDC70Q6NSX1 233 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 TRIM73Q86UV7 250 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 OR52E1Q8NGJ3 308 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 HM13Q8TCT9 377 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 ZNF398Q8TD17 642 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 GRHL3Q8TE85 626 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 PPP4R1Q8TF05 950 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 LCN9Q8WX39 176 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 SPRTNQ9H040 489 aaPredicted RBP14.84□□□□□ -0.03
MCF2L-228ENST00000487354 TFB2MQ9H5Q4 396 aaKnown RBP14.84□□□□□ -0.03
MCF2L-228ENST00000487354 HACD3Q9P035 362 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 SAE1Q9UBE0 346 aaPredicted RBP14.84□□□□□ -0.03
MCF2L-228ENST00000487354 SERTAD3Q9UJW9 196 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 ARL5AQ9Y689 179 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 COLEC10Q9Y6Z7 277 aa14.84□□□□□ -0.03
MCF2L-228ENST00000487354 CPAMD8Q8IZJ3 1885 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 NF1P21359 2839 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 KLHL33A6NCF5 533 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 IPO13O94829 963 aaKnown RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 HBQ1P09105 142 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 PECAM1P16284 738 aaPredicted RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 TSFMP43897 325 aaKnown RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 XIAPP98170 497 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 SLC9A5Q14940 896 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 FILIP1LQ4L180 1135 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 SP5Q6BEB4 398 aaPredicted RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 MCEMP1Q8IX19 187 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 CFAP206Q8IYR0 622 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 C19orf47Q8N9M1 422 aaKnown RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 SLX1AQ9BQ83 275 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms