RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TBC1D3IA0A087WXS9 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3EA0A087X179 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3KA0A087X1G2 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 A0A1W2PQF6 199 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SLC5A10A0PJK1 596 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 KLHL33A6NCF5 533 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3FA6NER0 549 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 LRRC14BA6NHZ5 514 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TMEM233B4DJY2 109 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3LB9A6J9 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 E9PBE3 544 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 H3BM21 787 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GFYI3L273 518 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 K7EPI3 171 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 K7ESM1 405 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SDHDO14521 159 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SLC22A2O15244 555 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CCNT2O60583 730 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 KLHL41O60662 606 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 RNGTTO60942 597 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ADAM23O75077 832 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 VPS4BO75351 444 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 KATNA1O75449 491 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SKAP2O75563 359 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SLCO2B1O94956 709 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ESRRBO95718 433 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GUCA1CO95843 209 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 OTCP00480 354 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PCCBP05166 539 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ASGR2P07307 311 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3HP0C7X1 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 UROSP10746 265 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 FOSL2P15408 326 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 EPB42P16452 691 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TSPAN8P19075 237 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 AOC1P19801 751 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PTPN4P29074 926 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 EPHA3P29320 983 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PBLDP30039 288 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PRDX6P30041 224 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ARL1P40616 181 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 AGTR2P50052 363 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 HNMTP50135 292 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CCNG1P51959 295 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CTSCP53634 463 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 INHBCP55103 352 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SH3BP2P78314 561 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 IRX1P78414 480 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 BTKQ06187 659 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GTF2H2Q13888 395 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ZRSR2Q15696 482 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PHKG1Q16816 387 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 LEXMQ3ZCV2 418 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ZNF648Q5T619 568 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 VWA5B1Q5TIE3 1220 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 KANK2Q63ZY3 851 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3GQ6DHY5 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3CQ6IPX1 549 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GTF2H2CQ6P1K8 395 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GPRIN3Q6ZVF9 776 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 GOLGA7Q7Z5G4 137 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM74Q86UV6 250 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 HEATR4Q86WZ0 1026 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 HORMAD1Q86X24 394 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 RGL4Q8IZJ4 473 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3Q8IZP1 549 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 BEND7Q8N7W2 519 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 RPLP0P6Q8NHW5 317 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 HM13Q8TCT9 377 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 MAPK15Q8TD08 544 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ACTRT2Q8TDY3 377 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 AGAP11Q8TF27 550 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ATL1Q8WXF7 558 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ASB11Q8WXH4 323 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ASB12Q8WXK4 309 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PPM1EQ8WY54 764 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 RHBDF1Q96CC6 855 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CMTM5Q96DZ9 223 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 COX14Q96I36 57 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 LRCH3Q96II8 777 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 MAELQ96JY0 434 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 LINC00615Q96LM1 132 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 NSUN5Q96P11 429 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 OR52B2Q96RD2 323 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ZNF382Q96SR6 550 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CCT7Q99832 543 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CCDC106Q9BWC9 280 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PRR14Q9BWN1 585 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 C1QTNF2Q9BXJ5 285 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SLC17A9Q9BYT1 436 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CD244Q9BZW8 370 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 MKRN2Q9H000 416 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 MEAF6Q9HAF1 191 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 POLMQ9NP87 494 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms