RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 ASZ1Q8WWH4 475 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 ARL8AQ96BM9 186 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 GAREM1Q9H706 876 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 POPDC3Q9HBV1 291 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 GPAMQ9HCL2 828 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 PRDM8Q9NQV8 689 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 WDR37Q9Y2I8 494 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 IGSF10Q6WRI0 2623 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 FAM221BA6H8Z2 402 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 LIN7AO14910 233 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 KPNA5O15131 536 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SNX2O60749 519 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 MPOP05164 745 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 APOA4P06727 396 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SYPP08247 313 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 MYZAPP0CAP1 466 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 PYGBP11216 843 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 CREB1P16220 341 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 DGKAP23743 735 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 RPL10P27635 214 aaKnown RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ACTR1BP42025 376 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ACTR1AP61163 376 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 HNRNPKP61978 463 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ABRQ12979 859 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 LRP8Q14114 963 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SEPT7Q16181 437 aaKnown RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SYTL3Q4VX76 610 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 TAF8Q7Z7C8 310 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 TRABD2AQ86V40 505 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 PLD6Q8N2A8 252 aaKnown RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ZNF548Q8NEK5 533 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 PGM2Q96G03 612 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 RUFY1Q96T51 708 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SH3GL2Q99962 352 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 VPS11Q9H270 941 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 OR52A5Q9H2C5 316 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 OSGEPL1Q9H4B0 414 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 SCHIP1Q9P0W5 487 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-229ENST00000486665 TAAR2Q9P1P5 351 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 TLK1Q9UKI8 766 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 IKZF3Q9UKT9 509 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ACSL5Q9ULC5 683 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 ACOT9Q9Y305 439 aa12.5□□□□□ -0.41
HDAC6-229ENST00000486665 LRP4O75096 1905 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 TMEM131Q92545 1883 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 TRBV23OR9-2A0A075B6M9 112 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 H3BM21 787 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 YY2O15391 372 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 AQP9O43315 295 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 BRAFP15056 766 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 ZNF37AP17032 561 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 VCLP18206 1134 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 IDSP22304 550 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 IL2P60568 153 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 ILF3Q12906 894 aaKnown RBP eCLIP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 RPA4Q13156 261 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 CLCA4Q14CN2 919 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 ELOCQ15369 112 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 TTLL9Q3SXZ7 439 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 CAPRIN2Q6IMN6 1127 aaKnown RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 IL27RAQ6UWB1 636 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 KANSL1Q7Z3B3 1105 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 PIWIL4Q7Z3Z4 852 aaKnown RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 EXOC3L1Q86VI1 746 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 SLC22A15Q8IZD6 547 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 FSTL5Q8N475 847 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 GLMNQ92990 594 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 TMEM159Q96B96 161 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 NXNL1Q96CM4 212 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 RMDN2Q96LZ7 410 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 UNKQ9C0B0 810 aaKnown RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 SYTL2Q9HCH5 934 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 IGSF5Q9NSI5 407 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 PCMTD2Q9NV79 361 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 ZNF358Q9NW07 568 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
HDAC6-229ENST00000486665 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
HDAC6-229ENST00000486665 KNL1Q8NG31 2342 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms