RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NEK10Q6ZWH5 1172 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 PARS2Q7L3T8 475 aaKnown RBP19.94■□□□□ 0.78
HPS3-206ENST00000486530 TECPR1Q7Z6L1 1165 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 TMEM126BQ8IUX1 230 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SMARCD2Q92925 531 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 PPP3R2Q96LZ3 170 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 VPS35Q96QK1 796 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 MBD1Q9UIS9 605 aaPredicted RBP19.94■□□□□ 0.78
HPS3-206ENST00000486530 LAMA3Q16787 3333 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 PSMD11O00231 422 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 MTX2O75431 263 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 HIST1H2AGP0C0S8 130 aaPredicted RBP19.94■□□□□ 0.78
HPS3-206ENST00000486530 ELFN1P0C7U0 828 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 HIST1H2ADP20671 130 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 ABRAXAS2Q15018 415 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 LDLRAP1Q5SW96 308 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 RARS2Q5T160 578 aaKnown RBP19.94■□□□□ 0.78
HPS3-206ENST00000486530 LRRC70Q7Z2Q7 622 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SPATA24Q86W54 205 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 ZNF366Q8N895 744 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SKA2Q8WVK7 121 aaPredicted RBP19.94■□□□□ 0.78
HPS3-206ENST00000486530 ASB11Q8WXH4 323 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 HIST1H2AHQ96KK5 128 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 HIST1H2AJQ99878 128 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SLC39A3Q9BRY0 314 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 H2AFJQ9BTM1 129 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SLC32A1Q9H598 525 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 IGFLR1Q9H665 355 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 SLC28A3Q9HAS3 691 aa19.94■□□□□ 0.78
HPS3-206ENST00000486530 TCF20Q9UGU0 1960 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 TRANK1O15050 2925 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 DYTNA2CJ06 578 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 FAM234BA2RU67 622 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 FADS2P1A8MWK0 482 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 C9JVG2 144 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 FXYD1O00168 92 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 LIN7AO14910 233 aaPredicted RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 PEX1O43933 1283 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 EEDO75530 441 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 C8BP07358 591 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 CYP2A7P20853 494 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 FSHRP23945 695 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 PEX2P28328 305 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 ZFP36L2P47974 494 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 HNMTP50135 292 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 POLR2JP52435 117 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 UFM1P61960 85 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 EIF4HQ15056 248 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 SMU1Q2TAY7 513 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 SPATS1Q496A3 300 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 IRGCQ6NXR0 463 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 SERPINA13PQ6UXR4 307 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 LIPIQ6XZB0 460 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 RAVER1Q8IY67 606 aaKnown RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 NRSN1Q8IZ57 195 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 BTN2A2Q8WVV5 523 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 ELMO1Q92556 727 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 NXPE3Q969Y0 559 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 SLC29A3Q9BZD2 475 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 EBF3Q9H4W6 596 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 DZANK1Q9NVP4 752 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 DEC1Q9P2X7 70 aa19.93■□□□□ 0.78
HPS3-206ENST00000486530 LEF1Q9UJU2 399 aaPredicted RBP19.93■□□□□ 0.78
HPS3-206ENST00000486530 CDH23Q9H251 3354 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 CCDC154A6NI56 674 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 PRRT4C9JH25 899 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 SLC28A1O00337 649 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 RGS14O43566 566 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 SGTAO43765 313 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 STAMBPO95630 424 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 ATXN3P54252 364 aaPredicted RBP19.92■□□□□ 0.78
HPS3-206ENST00000486530 POM121L1PQ3SYA9 428 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 FNDC3BQ53EP0 1204 aaKnown RBP19.92■□□□□ 0.78
HPS3-206ENST00000486530 OGFRL1Q5TC84 451 aaPredicted RBP19.92■□□□□ 0.78
HPS3-206ENST00000486530 LPCAT4Q643R3 524 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 PDSS2Q86YH6 399 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 ASZ1Q8WWH4 475 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 FGF13Q92913 245 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 LRRC58Q96CX6 371 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 MRPL38Q96DV4 380 aaKnown RBP19.92■□□□□ 0.78
HPS3-206ENST00000486530 TEX37Q96LM6 180 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 PCDHAC1Q9H158 963 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 OBP2AQ9NY56 170 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 CCL27Q9Y4X3 112 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 LRRK1Q38SD2 2015 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 EDDM13A0A1B0GTR0 161 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 PRSS51A0A1B0GVH4 220 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 H0Y858 1186 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 GFYI3L273 518 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 KPNA3O00505 521 aaPredicted RBP19.92■□□□□ 0.78
HPS3-206ENST00000486530 AP1S2P56377 157 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 PRKG2Q13237 762 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 AP5B1Q2VPB7 878 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 GAB4Q2WGN9 574 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 C6orf10Q5SRN2 563 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 ANO7Q6IWH7 933 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 GPR149Q86SP6 731 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 VRK3Q8IV63 474 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 ZFYVE19Q96K21 471 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 LRGUKQ96M69 825 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms