RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RBM12BQ8IXT5 1001 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 CFAP61Q8NHU2 1237 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 IFI44Q8TCB0 444 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 CD200R1Q8TD46 325 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 FERD3LQ96RJ6 166 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 INSM2Q96T92 566 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 ABCG4Q9H172 646 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 TRIT1Q9H3H1 467 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 SCHIP1Q9P0W5 487 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 KLHL42Q9P2K6 505 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 APOBEC2Q9Y235 224 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 ASF1AQ9Y294 204 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 DHRS7Q9Y394 339 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 LAMA1P25391 3075 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 EME2A4GXA9 379 aaPredicted RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 EIF3FO00303 357 aaPredicted RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 RFPL3O75679 317 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 FAM155BO75949 473 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 KRT37O76014 449 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 SLCO2B1O94956 709 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 C1QAP02745 245 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 GP1BAP07359 652 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CD9P21926 228 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CNTFP26441 200 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 HSD17B3P37058 310 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CDKN2DP55273 166 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 IL2P60568 153 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 SIM1P81133 766 aaPredicted RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 IFFO1Q0D2I5 559 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 ABRQ12979 859 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CAPRIN2Q6IMN6 1127 aaKnown RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 DUS1LQ6P1R4 473 aaKnown RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 GUSBP11Q6P575 273 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 UNC5DQ6UXZ4 953 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 RAPH1Q70E73 1250 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 PIM3Q86V86 326 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 SFTPA2Q8IWL1 248 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CPNE9Q8IYJ1 553 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 CNPY4Q8N129 248 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 MYO1HQ8N1T3 1032 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 SLC44A1Q8WWI5 657 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 AHCYL2Q96HN2 611 aaKnown RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 GPR22Q99680 433 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 MVB12BQ9H7P6 319 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 POPDC3Q9HBV1 291 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 GPAMQ9HCL2 828 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 KCNK4Q9NYG8 393 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 ZNF624Q9P2J8 865 aaPredicted RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 GALPQ9UBC7 116 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
NUP50-216ENST00000486184 RNF215Q9Y6U7 377 aa11.12□□□□□ -0.63
NUP50-216ENST00000486184 LY6G6EA0A0G2JKS1 128 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 IQANK1A0A1B0GTG1 560 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 KCNK5O95279 499 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 CATP04040 527 aaKnown RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 MPC1LP0DKB6 136 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 CDK4P11802 303 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 PNLIPP16233 465 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 MAP4P27816 1152 aaKnown RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 ALDH4A1P30038 563 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 CCNFP41002 786 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 SLC19A1P41440 591 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 GPR3P46089 330 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 ACADVLP49748 655 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 SERPINB8P50452 374 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 TAS2R39P59534 338 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 RAB10P61026 200 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 UBE2IP63279 158 aaKnown RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 ILKQ13418 452 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 BMPR2Q13873 1038 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUP50-216ENST00000486184 TAF1BQ53T94 588 aaPredicted RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 ACSBG2Q5FVE4 666 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 MROH9Q5TGP6 573 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 PAQR3Q6TCH7 311 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 TMEM26Q6ZUK4 368 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 NEK10Q6ZWH5 1172 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 GLRX5Q86SX6 157 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 C17orf82Q86X59 251 aaPredicted RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 TBC1D21Q8IYX1 336 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 RAB42Q8N4Z0 105 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 NKAPQ8N5F7 415 aaKnown RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 Q8N9G6 341 aaPredicted RBP11.11□□□□□ -0.63
NUP50-216ENST00000486184 OR10G6Q8NH81 332 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 MAGEC3Q8TD91 643 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 ZFPM2Q8WW38 1151 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 LINGO1Q96FE5 620 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 OLFM1Q99784 485 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 CCDC3Q9BQI4 270 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 MCMBPQ9BTE3 642 aa11.11□□□□□ -0.63
NUP50-216ENST00000486184 HGH1Q9BTY7 390 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms