RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 C16orf72Q14CZ0 275 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 TMED2Q15363 201 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 WHAMMP3Q1A5X7 153 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 SPANXN3Q5MJ09 141 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 SNAP47Q5SQN1 464 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ZNF470Q6ECI4 717 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 DUS1LQ6P1R4 473 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ZNF572Q7Z3I7 529 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 RCBTB1Q8NDN9 531 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 PHC3Q8NDX5 983 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ACVR1CQ8NER5 493 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 GSDMBQ8TAX9 411 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 LPGAT1Q92604 370 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 LRRC39Q96DD0 335 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 FAM167BQ9BTA0 163 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 TUBB2BQ9BVA1 445 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 PISDQ9UG56 409 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 SLC24A2Q9UI40 661 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 KIF26BQ2KJY2 2108 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 PMS2P1A4D2B8 440 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 A8MU76 341 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-211ENST00000486028 AGRPO00253 132 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 TAF4O00268 1085 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CAPN5O15484 640 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-211ENST00000486028 RAD51CO43502 376 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 S1PR4O95977 384 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 HGFP14210 728 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 AOAHP28039 575 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 ACADLP28330 430 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 FMO4P31512 558 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CAPZBP47756 277 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CSE1LP55060 971 aaKnown RBP12.13□□□□□ -0.47
HMG20B-211ENST00000486028 HSPA14Q0VDF9 509 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CRYMQ14894 314 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 ARMC6Q6NXE6 501 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CENPUQ71F23 418 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 OTOAQ7RTW8 1153 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 LCN9Q8WX39 176 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-211ENST00000486028 C9orf72Q96LT7 481 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 TGM7Q96PF1 710 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 RAB33BQ9H082 229 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 IL1RAPL1Q9NZN1 696 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 WHRNQ9P202 907 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 ZC3H7BQ9UGR2 993 aaKnown RBP12.13□□□□□ -0.47
HMG20B-211ENST00000486028 KLHL3Q9UH77 587 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 ASF1AQ9Y294 204 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 CRYL1Q9Y2S2 319 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
HMG20B-211ENST00000486028 MN1Q10571 1320 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 COL27A1Q8IZC6 1860 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 OR6C74A6NCV1 312 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 NVLO15381 856 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 GPC4O75487 556 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 BANF1O75531 89 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 SLCO2B1O94956 709 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 C9P02748 559 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CHRM3P20309 590 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 ELK3P41970 407 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 MAPK10P53779 464 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 GFERP55789 205 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CBX1P83916 185 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 PRKG2Q13237 762 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CTBP1Q13363 440 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 HP1BP3Q5SSJ5 553 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TMEM164Q5U3C3 297 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 DUPD1Q68J44 220 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 IRGCQ6NXR0 463 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 ARHGAP22Q7Z5H3 698 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CLEC14AQ86T13 490 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 KCNMB4Q86W47 210 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 OOSP2Q86WS3 158 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 IGDCC3Q8IVU1 814 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TBC1D21Q8IYX1 336 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 SLC22A15Q8IZD6 547 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 OR4E2Q8NGC2 313 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms