RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FTH1P02794 183 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 MT-ND3P03897 115 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 APRTP07741 180 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SLC35G4P0C7Q5 338 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 OR56A5P0C7T3 313 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SFTPCP11686 197 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 MLNP12872 115 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ETS1P14921 441 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TYRP1P17643 537 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ACADLP28330 430 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 GRIA1P42261 906 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 LEPRP48357 1165 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 GSK3AP49840 483 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 MMP16P51512 607 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ADARP55265 1226 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 GFERP55789 205 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 HSD11B2P80365 405 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SARNPP82979 210 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 ACY1Q03154 408 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SNX1Q13596 522 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 BOP1Q14137 746 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 SEPT7Q16181 437 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 SNAP47Q5SQN1 464 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ANKS6Q68DC2 871 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 AFTPHQ6ULP2 937 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 PPP1R21Q6ZMI0 780 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ZNF534Q76KX8 674 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 DET1Q7L5Y6 550 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TIPARPQ7Z3E1 657 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 PPP1R3BQ86XI6 285 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TBC1D21Q8IYX1 336 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 CACNA2D3Q8IZS8 1091 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 NLGN4XQ8N0W4 816 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 MPP5Q8N3R9 675 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ESX1Q8N693 406 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 PRELID2Q8N945 189 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 MCUQ8NE86 351 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 NLGN4YQ8NFZ3 816 aaPredicted RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 GPR150Q8NGU9 434 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ACTRT1Q8TDG2 376 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 RSC1A1Q92681 617 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TFGQ92734 400 aaPredicted RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 RMDN2Q96LZ7 410 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 ZNF778Q96MU6 729 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TGM7Q96PF1 710 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TCF12Q99081 682 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 COG4Q9H9E3 785 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 PDE7BQ9NP56 450 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 CHRAC1Q9NRG0 131 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 LATS2Q9NRM7 1088 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TREX1Q9NSU2 369 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 HRASLS2Q9NWW9 162 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SMARCAL1Q9NZC9 954 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 POLG2Q9UHN1 485 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 PSMD13Q9UNM6 376 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 BTRCQ9Y297 605 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 NEU2Q9Y3R4 380 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TCAF1Q9Y4C2 921 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 BAHCC1Q9P281 2608 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SNRNP200O75643 2136 aaKnown RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 MED13Q9UHV7 2174 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 IGHV5-51A0A0C4DH38 117 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 EIF4E1BA6NMX2 242 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 PRMT5O14744 637 aaPredicted RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 KPNA5O15131 536 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 RAD1O60671 282 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 SPAG6O75602 509 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 STK17BO94768 372 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 SLCO2B1O94956 709 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 ZBTB11O95625 1053 aaPredicted RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 POLBP06746 335 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 ZSCAN5DPP0CG00 497 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 RPS3P23396 243 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS50-218ENST00000485994 PDHA2P29803 388 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 COILP38432 576 aaPredicted RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 MAPK9P45984 424 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 KCNJ1P48048 391 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 LMAN1P49257 510 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 TTPAP49638 278 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 PRAMEP78395 509 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 MC1RQ01726 317 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 SEPT6Q14141 434 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 LINC00303Q3SY05 128 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 CCDC38Q502W7 563 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 FASTKD1Q53R41 847 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 AARS2Q5JTZ9 985 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 ZNF517Q6ZMY9 492 aaPredicted RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 GSTA5Q7RTV2 222 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 OOSP2Q86WS3 158 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 LRRC6Q86X45 466 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 FAM129CQ86XR2 697 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 LILRA3Q8N6C8 439 aaPredicted RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 CLDN19Q8N6F1 224 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 SIDT2Q8NBJ9 832 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 OR4E2Q8NGC2 313 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 PMEPA1Q969W9 287 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 MED8Q96G25 268 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms