RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 MELKQ14680 651 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 FAM98BQ52LJ0 330 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 GRTP1Q5TC63 336 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 ARHGEF16Q5VV41 709 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 PWWP2BQ6NUJ5 590 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 ZNF554Q86TJ5 538 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 AACSQ86V21 672 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 CPSF7Q8N684 471 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 ZNF611Q8N823 705 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 GRHL3Q8TE85 626 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 ZFAND2BQ8WV99 257 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 HDAC2Q92769 488 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 LRRC59Q96AG4 307 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 MOAP1Q96BY2 351 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 ZNF689Q96CS4 500 aaPredicted RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 MPP4Q96JB8 637 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 EGFL8Q99944 293 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 PLCXD1Q9NUJ7 323 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 INTS9Q9NV88 658 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 PAK5Q9P286 719 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 ASIC3Q9UHC3 531 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 AMACRQ9UHK6 382 aa3.45□□□□□ -1.86
VPS41-213ENST00000485955 EXO1Q9UQ84 846 aaKnown RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 COL2A1P02458 1487 aaPredicted RBP3.45□□□□□ -1.86
VPS41-213ENST00000485955 MYO15BQ96JP2 1530 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 CDRT15L2A8MXV6 281 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 F5H0A9 414 aaPredicted RBP3.44□□□□□ -1.86
VPS41-213ENST00000485955 AP2A2O94973 939 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 EDN1P05305 212 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 CEBPBP17676 345 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 B3GALT5-AS1P59052 145 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 FAAH2Q6GMR7 532 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 FAM180BQ6P0A1 224 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 INTS8Q75QN2 995 aaKnown RBP3.44□□□□□ -1.86
VPS41-213ENST00000485955 MCEMP1Q8IX19 187 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 ADGRF2Q8IZF7 708 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 PPHLN1Q8NEY8 458 aaKnown RBP3.44□□□□□ -1.86
VPS41-213ENST00000485955 OR1J1Q8NGS3 322 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 MRGPRDQ8TDS7 321 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 SGK494Q96LW2 274 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 A4GALTQ9NPC4 353 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
VPS41-213ENST00000485955 KLHL8Q9P2G9 620 aaPredicted RBP3.44□□□□□ -1.86
VPS41-213ENST00000485955 RIPK3Q9Y572 518 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 SMARCA4P51532 1647 aa3.44□□□□□ -1.86
VPS41-213ENST00000485955 IGHV4-4A0A075B6R2 117 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 A0A087WW49 117 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 A0A1W2PRB8 838 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 MED19A0JLT2 244 aaPredicted RBP3.43□□□□□ -1.86
VPS41-213ENST00000485955 HEPACAM2A8MVW5 462 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 PRR32B1ATL7 298 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 PTGES3LE9PB15 166 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 H7C423 109 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 ATP6V0E1O15342 81 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 MITFO75030 526 aaPredicted RBP3.43□□□□□ -1.86
VPS41-213ENST00000485955 CREG1O75629 220 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 PIGNO95427 931 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 DPEP1P16444 411 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 XKR6Q5GH73 641 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 TBC1D1Q86TI0 1168 aaPredicted RBP3.43□□□□□ -1.86
VPS41-213ENST00000485955 GTSCR1Q86UQ5 136 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 MAPKAPK5-AS1Q8N8E1 139 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 KBTBD8Q8NFY9 601 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 OR2T11Q8NH01 316 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 RNF128Q8TEB7 428 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 HPSE2Q8WWQ2 592 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 MOCOSQ96EN8 888 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 CEP295NLQ96MC4 621 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 OR6C1Q96RD1 312 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 VGLL1Q99990 258 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 SYT11Q9BT88 431 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 TRIM15Q9C019 465 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 HRH4Q9H3N8 390 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 OSER1Q9NX31 292 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 TAB2Q9NYJ8 693 aa3.43□□□□□ -1.86
VPS41-213ENST00000485955 EXOGQ9Y2C4 368 aaKnown RBP3.43□□□□□ -1.86
VPS41-213ENST00000485955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS41-213ENST00000485955 ADGRL1O94910 1474 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 SSX4O60224 188 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 MFAP4P55083 255 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 KRTAP10-3P60369 221 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 SNRPD1P62314 119 aaKnown RBP3.42□□□□□ -1.86
VPS41-213ENST00000485955 CDR2Q01850 454 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 DMPKQ09013 629 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 DDX10Q13206 875 aaKnown RBP3.42□□□□□ -1.86
VPS41-213ENST00000485955 GPR17Q13304 367 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 RRS1Q15050 365 aaKnown RBP3.42□□□□□ -1.86
VPS41-213ENST00000485955 MDH1BQ5I0G3 518 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 LINGO4Q6UY18 593 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 Q6ZSR9 355 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 STXBP4Q6ZWJ1 553 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 FAM114A1Q8IWE2 563 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 ZNF440Q8IYI8 595 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 TMEM178AQ8NBL3 297 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 OR4C3Q8NH37 302 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 MTERF3Q96E29 417 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 VN1R1Q9GZP7 353 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 LAT2Q9GZY6 243 aa3.42□□□□□ -1.86
VPS41-213ENST00000485955 ARRDC1-AS1Q9H2J1 176 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms