RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ALDH4A1P30038 563 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CCR7P32248 378 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 HSD17B2P37059 387 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 ACADVLP49748 655 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SERPINB9P50453 376 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 IL2P60568 153 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 POU4F1Q01851 419 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SPIDRQ14159 915 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 FASTKD3Q14CZ7 662 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PLCL1Q15111 1095 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TRADDQ15628 312 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 KYNUQ16719 465 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 COL28A1Q2UY09 1125 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 KCTD16Q68DU8 428 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CAPRIN2Q6IMN6 1127 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TRMT10BQ6PF06 316 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 UNC5DQ6UXZ4 953 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CCNI2Q6ZMN8 369 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 RBM44Q6ZP01 1051 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TMEM26Q6ZUK4 368 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF438Q7Z4V0 828 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PIM3Q86V86 326 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PLXDC1Q8IUK5 500 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TBC1D21Q8IYX1 336 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SLC22A15Q8IZD6 547 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 NAGSQ8N159 534 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CACTIN-AS1Q8N1I8 211 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 NKAPQ8N5F7 415 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PPM1NQ8N819 430 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 GPATCH11Q8N954 259 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 Q8N9G6 341 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 ACVR1CQ8NER5 493 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 MDM1Q8TC05 714 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SLC37A2Q8TED4 501 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 FBF1Q8TES7 1133 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 ZDHHC12Q96GR4 267 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 HIST1H2AHQ96KK5 128 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TMEM74Q96NL1 305 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 BIRC8Q96P09 236 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 GFM1Q96RP9 751 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 HIST1H2AJQ99878 128 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 CCDC3Q9BQI4 270 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 AARSD1Q9BTE6 412 aaKnown RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 H2AFJQ9BTM1 129 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 RAB11FIP5Q9BXF6 653 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 RHOJQ9H4E5 214 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 POPDC3Q9HBV1 291 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SLC40A1Q9NP59 571 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 IL1RAPL1Q9NZN1 696 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 LNPEPQ9UIQ6 1025 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 PSMD13Q9UNM6 376 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 DHRS7Q9Y394 339 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
SF3A1-208ENST00000485618 COL5A1P20908 1838 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-208ENST00000485618 SLC5A10A0PJK1 596 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 A6NCN8 305 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 LILRA5A6NI73 299 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 FAM159BA6NKW6 160 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 OR52A4PA6NMU1 304 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 OPA1O60313 960 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ERLIN1O75477 346 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 KRT38O76015 456 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ACSL3O95573 720 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CPNE6O95741 557 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CATP04040 527 aaKnown RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ABHD2P08910 425 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CRABP2P29373 138 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SHMT2P34897 504 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CA5AP35218 305 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SLC19A1P41440 591 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 MSH2P43246 934 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 PREPP48147 710 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 MAZP56270 477 aaKnown RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 UBE2IP63279 158 aaKnown RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 MPP1Q00013 466 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ABRQ12979 859 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 DNAJC3Q13217 504 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SQSTM1Q13501 440 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 USP10Q14694 798 aaKnown RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 NR1D2Q14995 579 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 BRD3Q15059 726 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 KBTBD12Q3ZCT8 623 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 WDR93Q6P2C0 686 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 GUSBP11Q6P575 273 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CYB5D1Q6P9G0 228 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 EMBQ6PCB8 327 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 CNSTQ6PJW8 725 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 WDR74Q6RFH5 385 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 FAM83HQ6ZRV2 1179 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 OOSP2Q86WS3 158 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 MYO1HQ8N1T3 1032 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 OR5K2Q8NHB8 316 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 LCN9Q8WX39 176 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ANKRD7Q92527 254 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms