RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	PDE7B	Q9NP56	450 aa		10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	LUC7L	Q9NQ29	371 aa	Known RBP	10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	KCND3	Q9UK17	655 aa		10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	RARRES3	Q9UL19	164 aa		10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	PADI1	Q9ULC6	663 aa		10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	AAR2	Q9Y312	384 aa	Known RBP	10.31	□□□□□ -0.76
HMGN1-215	ENST00000485550	PIPSL	A2A3N6	862 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	OR6C74	A6NCV1	312 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	OR5K3	A6NET4	321 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	C5orf60	A6NFR6	353 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	WIPF3	A6NGB9	483 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	PJA2	O43164	708 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	SGTA	O43765	313 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	CREG1	O75629	220 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	SORBS2	O94875	1100 aa	Known RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	LDLR	P01130	860 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	PRSS56	P0CW18	603 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	TPH1	P17752	444 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	POLR2C	P19387	275 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	CDKN1C	P49918	316 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	COPS2	P61201	443 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	CHAF1B	Q13112	559 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	MSLN	Q13421	630 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	DNASE1L3	Q13609	305 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	CPZ	Q66K79	652 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	DENND5A	Q6IQ26	1287 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	ARMC6	Q6NXE6	501 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	KLHL35	Q6PF15	583 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	RAD9B	Q6WBX8	426 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	TAB3	Q8N5C8	712 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	ACRBP	Q8NEB7	543 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	OR4E2	Q8NGC2	313 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	OR2L2	Q8NH16	312 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	CT55	Q8WUE5	264 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	ALG3	Q92685	438 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	ZNF514	Q96K75	400 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	NRTN	Q99748	197 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	TBL1Y	Q9BQ87	522 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	LACRT	Q9GZZ8	138 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	LHX9	Q9NQ69	397 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	FGF21	Q9NSA1	209 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	SMOX	Q9NWM0	555 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLC24A2	Q9UI40	661 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	ACSL5	Q9ULC5	683 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	REXO2	Q9Y3B8	237 aa	Known RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	MYO7B	Q6PIF6	2116 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	POLE	Q07864	2286 aa		10.3	□□□□□ -0.76
HMGN1-215	ENST00000485550	APC	P25054	2843 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	CCDC66	A2RUB6	948 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	STK10	O94804	968 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	IPO7	O95373	1038 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	CRTAM	O95727	393 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PTMA	P06454	111 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLC35G4	P0C7Q5	338 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	MC4R	P32245	332 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	CETN2	P41208	172 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	ZNF75D	P51815	510 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PGD	P52209	483 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	RPS18	P62269	152 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	ACY1	Q03154	408 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	GPR19	Q15760	415 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	BCL7A	Q4VC05	210 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	ZRANB3	Q5FWF4	1079 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PRAMEF17	Q5VTA0	474 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	TAS2R42	Q7RTR8	314 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	OOSP2	Q86WS3	158 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	APLF	Q8IW19	511 aa	Predicted RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PHC3	Q8NDX5	983 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	DNAJC1	Q96KC8	554 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	RMDN2	Q96LZ7	410 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	SPATA13	Q96N96	652 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	FERD3L	Q96RJ6	166 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	COPS8	Q99627	209 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLC25A23	Q9BV35	468 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PIH1D1	Q9NWS0	290 aa	Known RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	SOHLH2	Q9NX45	425 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	SEMA5B	Q9P283	1151 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	CNTRL	Q7Z7A1	2325 aa		10.29	□□□□□ -0.76
HMGN1-215	ENST00000485550	OTOG	Q6ZRI0	2925 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550		A0A0U1RQJ8	604 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	CCDC78	A2IDD5	438 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	GRID2IP	A4D2P6	1211 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	GOLGA6L3	A6NEY3	463 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	TLCD2	A6NGC4	264 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLC9B1P1	A6NJY1	282 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	LDB2	O43679	373 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	TJP3	O95049	919 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	METTL18	O95568	372 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	MT-ND3	P03897	115 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	RALB	P11234	206 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	ATP1B2	P14415	290 aa	Predicted RBP	10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	ITGAL	P20701	1170 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	CCL11	P51671	97 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	KPNA2	P52292	529 aa	Known RBP	10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	ZNF140	P52738	457 aa	Predicted RBP	10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	HSD11B2	P80365	405 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	CYB5D1	Q6P9G0	228 aa		10.28	□□□□□ -0.76

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