RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 LEPRP48357 1165 aaKnown RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 MAPK10P53779 464 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 MPP1Q00013 466 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 CALCOCO2Q13137 446 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 PRKG2Q13237 762 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 TMED2Q15363 201 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 WHAMMP3Q1A5X7 153 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 HSP90AA5PQ58FG0 334 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 FAM92BQ6ZTR7 304 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 ZNF578Q96N58 590 aaPredicted RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 SLC46A1Q96NT5 459 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 PANX3Q96QZ0 392 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 NRTNQ99748 197 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 IARS2Q9NSE4 1012 aaKnown RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 WHRNQ9P202 907 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 PDP2Q9P2J9 529 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 ASF1AQ9Y294 204 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 OR6C74A6NCV1 312 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 KIF2AO00139 706 aaPredicted RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 NDC80O14777 642 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 RASSF9O75901 435 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 S1PR4O95977 384 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 C9P02748 559 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ESR1P03372 595 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ITGA2BP08514 1039 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 CCL4P13236 92 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ACADLP28330 430 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ERVPABLB-1P60509 514 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 PLOD1Q02809 727 aaPredicted RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 DUPD1Q68J44 220 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 IGF2-ASQ6U949 168 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 UNC5AQ6ZN44 842 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 OTOAQ7RTW8 1153 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ARHGAP22Q7Z5H3 698 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ANKMY2Q8IV38 441 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 OR4E2Q8NGC2 313 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 OR52E1Q8NGJ3 308 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 CALML6Q8TD86 181 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ZFPM2Q8WW38 1151 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ASZ1Q8WWH4 475 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 FGF11Q92914 225 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 C9orf72Q96LT7 481 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 FAM167BQ9BTA0 163 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 MVB12BQ9H7P6 319 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 PLAC1Q9HBJ0 212 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ZC3H7BQ9UGR2 993 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 CDYLQ9Y232 598 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 UTP11Q9Y3A2 253 aaKnown RBP13.04□□□□□ -0.32
SSR1-208ENST00000483409 MRFAP1Q9Y605 127 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 TEX264Q9Y6I9 313 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
SSR1-208ENST00000483409 ANKRD12Q6UB98 2062 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 OR5K3A6NET4 321 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 KIF1CO43896 1103 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 GPC4O75487 556 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 CHRM3P20309 590 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 SEPHS1P49903 392 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 ADARP55265 1226 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 PCBP4P57723 403 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 ABRQ12979 859 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 CACHD1Q5VU97 1274 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 C8orf74Q6P047 294 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 OOSP2Q86WS3 158 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 LMNTD2Q8IXW0 634 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 FBXO36Q8NEA4 188 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 CFAP61Q8NHU2 1237 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 GSDMBQ8TAX9 411 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 SKA2Q8WVK7 121 aaPredicted RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 LCN9Q8WX39 176 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 USP7Q93009 1102 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 PMEPA1Q969W9 287 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 CERS2Q96G23 380 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms