RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 KRT33BQ14525 404 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 PERM1Q5SV97 790 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 C17orf82Q86X59 251 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-224ENST00000483359 IFI44Q8TCB0 444 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 DCAKDQ8WVC6 231 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 TFGQ92734 400 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-224ENST00000483359 CDC6Q99741 560 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 LATS2Q9NRM7 1088 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 CIDEBQ9UHD4 219 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 EME2A4GXA9 379 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 TNFSF14O43557 240 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 GLB1P16278 677 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 SLCO1A2P46721 670 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 UBE2IP63279 158 aaKnown RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 PIWIL4Q7Z3Z4 852 aaKnown RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 Q8N9G6 341 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 OR5AR1Q8NGP9 310 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 EEF1AKMT1Q8WVE0 214 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 FERD3LQ96RJ6 166 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 HGH1Q9BTY7 390 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 POT1Q9NUX5 634 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 NCKIPSDQ9NZQ3 722 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 CTNNAL1Q9UBT7 734 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 HMX2A2RU54 273 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 STMN1P16949 149 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 XRCC1P18887 633 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 ACADLP28330 430 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 GMPRP36959 345 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 FASLGP48023 281 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 PPM1FP49593 454 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 POU4F1Q01851 419 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 PRKG2Q13237 762 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 GBX1Q14549 363 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 EPS8L3Q8TE67 593 aaKnown RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 ZBTB9Q96C00 473 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 LINGO1Q96FE5 620 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 UNKQ9C0B0 810 aaKnown RBP17.4■□□□□ 0.38
CPNE1-224ENST00000483359 SYNDIG1Q9H7V2 258 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 GPAMQ9HCL2 828 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 TBK1Q9UHD2 729 aa17.4■□□□□ 0.38
CPNE1-224ENST00000483359 NUDT21O43809 227 aaKnown RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 ERLIN1O75477 346 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 ZNF37AP17032 561 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CSRP1P21291 193 aaKnown RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 ALDH4A1P30038 563 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 ACADVLP49748 655 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 DUSP3P51452 185 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 SIM1P81133 766 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 GPR18Q14330 331 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 TMEM207Q6UWW9 146 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 RAPH1Q70E73 1250 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 SLC38A3Q99624 504 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CCDC3Q9BQI4 270 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CCDC77Q9BR77 488 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 SLC40A1Q9NP59 571 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 EVA1BQ9NVM1 165 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 TDRKHQ9Y2W6 561 aaKnown RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CCDC151A5D8V7 595 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 KRT87PA6NCN2 255 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 ACP1P24666 158 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 MAPK9P45984 424 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 BDKRB1P46663 353 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 PLCL1Q15111 1095 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-224ENST00000483359 TAOK1Q7L7X3 1001 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 SPATA6LQ8N4H0 392 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 NAT6Q93015 286 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 TSPAN17Q96FV3 270 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 NRTNQ99748 197 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 DHRS4Q9BTZ2 278 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 TBC1D10AQ9BXI6 508 aa17.39■□□□□ 0.37
CPNE1-224ENST00000483359 CD9P21926 228 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 RGS4P49798 205 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 OR1D5P58170 312 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 RAB10P61026 200 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 IFFO1Q0D2I5 559 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 MREGQ8N565 214 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 ANKRD49Q8WVL7 239 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 RTKNQ9BST9 563 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 TOR4AQ9NXH8 423 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 KLHL42Q9P2K6 505 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 PSMC3IPQ9P2W1 217 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-224ENST00000483359 ZNF180Q9UJW8 692 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 PLAGL1Q9UM63 463 aa17.38■□□□□ 0.37
CPNE1-224ENST00000483359 TRIM49D1C9J1S8 452 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 KRT38O76015 456 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 KCNK5O95279 499 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ENO3P13929 434 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ATP5DP30049 168 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 SERPINB9P50453 376 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 IL2P60568 153 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ZKSCAN8Q15776 578 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-224ENST00000483359 AMZ1Q400G9 498 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 TMEM26Q6ZUK4 368 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 MYO1HQ8N1T3 1032 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 OR5K2Q8NHB8 316 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 FOPNLQ96NB1 174 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 TRIT1Q9H3H1 467 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms