RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 HSPA8P11142 646 aaKnown RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 CETPP11597 493 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 SELLP14151 372 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 ANXA7P20073 488 aaKnown RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 UBA1P22314 1058 aaKnown RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 HOXC9P31274 260 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 METAP2P50579 478 aaKnown RBP eCLIP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PNLIPRP2P54317 469 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PSMC6P62333 389 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PHEXP78562 749 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 ZNF155Q12901 538 aaPredicted RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 BAATQ14032 418 aaPredicted RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 CTF1Q16619 201 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 SYT16Q17RD7 645 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PNLIPRP3Q17RR3 467 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 KRTAP24-1Q3LI83 254 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 MMEL1Q495T6 779 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 C9orf152Q5JTZ5 239 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PMS2CLQ68D20 193 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PLEKHA7Q6IQ23 1121 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 KRT80Q6KB66 452 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 B3GNT6Q6ZMB0 384 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 MEX3BQ6ZN04 569 aaKnown RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PQLC2Q6ZP29 291 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 FOXL2NBQ6ZUU3 175 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 DPPA4Q7L190 304 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 TRMT1LQ7Z2T5 733 aaKnown RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 IL17RCQ8NAC3 791 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 OR8K5Q8NH50 307 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 IGSF8Q969P0 613 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 SH3GL2Q99962 352 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 CCDC177Q9NQR7 707 aaPredicted RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 CNGB3Q9NQW8 809 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 STON1Q9Y6Q2 735 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 COL5A3P25940 1745 aaPredicted RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 LTBP1Q14766 1721 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 TNRC18O15417 2968 aaPredicted RBP3.63□□□□□ -1.83
GTF3A-207ENST00000482655 PALLDQ8WX93 1383 aa3.63□□□□□ -1.83
GTF3A-207ENST00000482655 C1orf226A1L170 272 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 FAM172BPA6NC97 362 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 PRR23AA6NEV1 266 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 CYSRT1A8MQ03 144 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 H7C0S8 307 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 VCYO14598 125 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 PLRG1O43660 514 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 TBCAO75347 108 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 TPOP07202 933 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 HSP90AB1P08238 724 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 MMP10P09238 476 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 ZNF132P52740 706 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 LBX1P52954 281 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 UBXN2AP68543 259 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 C2orf68Q2NKX9 166 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 IGSF11Q5DX21 431 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 TCP11X2Q5H9J9 407 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 PAPPA-AS1Q5QFB9 102 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 RARS2Q5T160 578 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 IRAK1BP1Q5VVH5 260 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 KRT79Q5XKE5 535 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 RPUSD3Q6P087 351 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 CFAP77Q6ZQR2 320 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 LINC00346Q8IVM7 164 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 MINDY1Q8N5J2 469 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 ZMAT2Q96NC0 199 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 ABHD1Q96SE0 405 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 GAD1Q99259 594 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 ACOX2Q99424 681 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 PAFAH2Q99487 392 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 OR10A4Q9H209 315 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 MMP28Q9H239 520 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 DDX4Q9NQI0 724 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 KCNS2Q9ULS6 477 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 NOL7Q9UMY1 257 aaKnown RBP3.62□□□□□ -1.83
GTF3A-207ENST00000482655 KDRP35968 1356 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 CNTNAP1P78357 1384 aa3.62□□□□□ -1.83
GTF3A-207ENST00000482655 NRXN2Q9P2S2 1712 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 DLEC1Q9Y238 1755 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 AFDNP55196 1824 aaKnown RBP3.61□□□□□ -1.83
GTF3A-207ENST00000482655 FAM170AA1A519 330 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 ERVV-2B6SEH9 535 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 ATP2A1O14983 1001 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 MID1O15344 667 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 FGF17O60258 216 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 GGPS1O95749 300 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 MYBL1P10243 752 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 G6PDP11413 515 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 VPREB1P12018 145 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 GJA1P17302 382 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 MAOAP21397 527 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 ANOS1P23352 680 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 MSH2P43246 934 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 ARSEP51690 589 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 GPR143P51810 404 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
GTF3A-207ENST00000482655 GRIK2Q13002 908 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 KRT33BQ14525 404 aa3.61□□□□□ -1.83
GTF3A-207ENST00000482655 RBBP5Q15291 538 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms