RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 POPDC2Q9HBU9 364 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 MPP6Q9NZW5 540 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 COX16Q9P0S2 106 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 ZNF624Q9P2J8 865 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 CDC23Q9UJX2 597 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SOX13Q9UN79 622 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 MRPS2Q9Y399 296 aaKnown RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 A0A0G2JNJ9 132 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 A0A1B0GTH9 108 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 KDM4EB2RXH2 506 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 TMEM150CB9EJG8 249 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 CTIFO43310 598 aaKnown RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 NDUFB5O43674 189 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 MLYCDO95822 493 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 TRUB2O95900 331 aaKnown RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 CYP1A1P04798 512 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 ELFN1P0C7U0 828 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 CYP2A7P20853 494 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 MMP11P24347 488 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 PTGS2P35354 604 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ACVRL1P37023 503 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 PRPHP41219 470 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 BST2Q10589 180 aaKnown RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 CUL4AQ13619 759 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 GPR18Q14330 331 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ACOX1Q15067 660 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 TUBB8Q3ZCM7 444 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 C5orf22Q49AR2 442 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 EMC4Q5J8M3 183 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 HIBCHQ6NVY1 386 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 ERAP2Q6P179 960 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 PMF1Q6P1K2 205 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 STRADAQ7RTN6 431 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 WDR53Q7Z5U6 358 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 SETD3Q86TU7 594 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 GALNT13Q8IUC8 556 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ELOA2Q8IYF1 753 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 LIX1Q8N485 282 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 OR11G2Q8NGC1 345 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SUN3Q8TAQ9 357 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ARHGEF2Q92974 986 aaKnown RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SARGQ9BW04 601 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SLC7A5P2Q9GIP4 190 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 RAB33BQ9H082 229 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SHARPINQ9H0F6 387 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SIK2Q9H0K1 926 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 RETREG1Q9H6L5 497 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ZNF160Q9HCG1 818 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 KIAA1586Q9HCI6 787 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 KLHL1Q9NR64 748 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 Q9UFV3 132 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 NDOR1Q9UHB4 597 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 SIK3Q9Y2K2 1263 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 ATP8A1Q9Y2Q0 1164 aa6.21□□□□□ -1.42
CHD6-209ENST00000482596 RAI1Q7Z5J4 1906 aaPredicted RBP6.21□□□□□ -1.42
CHD6-209ENST00000482596 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 TSPAN11A1L157 253 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ASPDHA6ND91 283 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 OR5H15A6NDH6 313 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 MAPK13O15264 365 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ZNF749O43361 778 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 CBFA2T2O43439 604 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ADAM11O75078 769 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 VIPP01282 170 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 HLA-DRAP01903 254 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 CELA2AP08217 269 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 TMIGD3P0DMS9 266 aaPredicted RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 ACP5P13686 325 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 OR1E1P30953 314 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 UBA7P41226 1012 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ZFP36L2P47974 494 aaKnown RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 COMPP49747 757 aaPredicted RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 SUOXP51687 545 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 LRP8Q14114 963 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 VEZF1Q14119 521 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 POLD3Q15054 466 aaPredicted RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 BRD3Q15059 726 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ARTNQ5T4W7 220 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 Q6ZS46 218 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 SHISA6Q6ZSJ9 500 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 KMT5CQ86Y97 462 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ZNF683Q8IZ20 524 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 PARD3BQ8TEW8 1205 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 SLCO2A1Q92959 643 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 DNAJC19Q96DA6 116 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 NUS1Q96E22 293 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 INTS4Q96HW7 963 aaKnown RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 EXOC2Q96KP1 924 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 COQ10AQ96MF6 247 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 PKP2Q99959 881 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 TP63Q9H3D4 680 aaPredicted RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 ESRP2Q9H6T0 727 aaKnown RBP6.2□□□□□ -1.42
CHD6-209ENST00000482596 CYP3A43Q9HB55 503 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 POT1Q9NUX5 634 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 IFT80Q9P2H3 777 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms