RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 A6NCN8 305 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 RASGRF2O14827 1237 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 GPC4O75487 556 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 LDOC1O95751 146 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-208ENST00000482310 VIPP01282 170 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 NUDT17P0C025 328 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 MTHFD1P11586 935 aaKnown RBP12.92□□□□□ -0.34
HDAC1-208ENST00000482310 SLC2A4P14672 509 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 MAPK9P45984 424 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 RAB10P61026 200 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 IRF9Q00978 393 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 PRKG2Q13237 762 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 C14orf28Q4W4Y0 310 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 PPM1JQ5JR12 505 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 IYDQ6PHW0 289 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 LVRNQ6Q4G3 990 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 TMEM207Q6UWW9 146 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 SDR16C5Q8N3Y7 309 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 ARL14Q8N4G2 192 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 OR5AR1Q8NGP9 310 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 NRTNQ99748 197 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 DHRS4Q9BTZ2 278 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 ZMYND15Q9H091 742 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 VPS11Q9H270 941 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF624Q9P2J8 865 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-208ENST00000482310 CPNE7Q9UBL6 633 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 SLC24A2Q9UI40 661 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 CDV3Q9UKY7 258 aaKnown RBP12.92□□□□□ -0.34
HDAC1-208ENST00000482310 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 ASF1AQ9Y294 204 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 RNF215Q9Y6U7 377 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
HDAC1-208ENST00000482310 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 KLHL33A6NCF5 533 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 NPEPPSL1A6NEC2 478 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 KRT37O76014 449 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SLCO2B1O94956 709 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 ALDOAP04075 364 aaKnown RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SNRPAP09012 282 aaKnown RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 H2AFXP16104 143 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF37AP17032 561 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 KRT15P19012 456 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 TYK2P29597 1187 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SLC19A1P41440 591 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 RGS4P49798 205 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 IL2P60568 153 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 HHEXQ03014 270 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 RPA4Q13156 261 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SLC14A1Q13336 389 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 CSHL1Q14406 222 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 PLCL1Q15111 1095 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 KRT71Q3SY84 523 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 CEP85LQ5SZL2 805 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 AGAP9Q5VTM2 703 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 CAPRIN2Q6IMN6 1127 aaKnown RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 ABRAXAS1Q6UWZ7 409 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 EFL1Q7Z2Z2 1120 aaKnown RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 CYP4X1Q8N118 509 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 Q8N9G6 341 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 GPR156Q8NFN8 814 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 NETO1Q8TDF5 533 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 ANKRD49Q8WVL7 239 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 TFGQ92734 400 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 EXT2Q93063 718 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
HDAC1-208ENST00000482310 PCMTD2Q9NV79 361 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF180Q9UJW8 692 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 PADI4Q9UM07 663 aa12.91□□□□□ -0.34
HDAC1-208ENST00000482310 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 A0A096LPK6 155 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 LY6G6EA0A0G2JKS1 128 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 CASC3O15234 703 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 PPM1DO15297 605 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 SLC35E2BP0CK96 405 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 CCDC166P0CW27 439 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 SKIV2L2P42285 1042 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 GBX1Q14549 363 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 CASP8Q14790 479 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TAF1BQ53T94 588 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 LGSNQ5TDP6 509 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 WASH2PQ6VEQ5 465 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TBC1D1Q86TI0 1168 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms