RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 VOPP1Q96AW1 172 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 RHBDF1Q96CC6 855 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 HERC2P3Q9BVR0 1158 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 SEZ6LQ9BYH1 1024 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 ATP13A3Q9H7F0 1226 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 SMPD3Q9NY59 655 aaPredicted RBP16.8■□□□□ 0.28
PKD1-213ENST00000480227 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 KLQ9UEF7 1012 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 CCL27Q9Y4X3 112 aa16.8■□□□□ 0.28
PKD1-213ENST00000480227 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 NFKBIAP25963 317 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 PLEKHG6Q3KR16 790 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 TMEM214Q6NUQ4 689 aaKnown RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 LSM7Q9UK45 103 aaKnown RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 SH3BP1Q9Y3L3 701 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 PCDHB3Q9Y5E6 796 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 C5orf42Q9H799 3197 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 DFNA5O60443 496 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 VARSP26640 1264 aaKnown RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 SPAM1P38567 509 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 PLCL1Q15111 1095 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 KCTD21Q4G0X4 260 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 CYBRD1Q53TN4 286 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 DNAJC14Q6Y2X3 702 aaPredicted RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 NXPE1Q8N323 547 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 DHRSXQ8N5I4 330 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 MTFMTQ96DP5 389 aaKnown RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 CD244Q9BZW8 370 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 NEUROG3Q9Y4Z2 214 aa16.79■□□□□ 0.28
PKD1-213ENST00000480227 HEMK1Q9Y5R4 338 aaPredicted RBP16.79■□□□□ 0.28
PKD1-213ENST00000480227 A0A087WXM4 84 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 DYTNA2CJ06 578 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 BMP10O95393 424 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 IGSF6O95976 241 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 PWP1Q13610 501 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ARHGEF7Q14155 803 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 FAM174BQ3ZCQ3 159 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 TMEM259Q4ZIN3 620 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 LRRC66Q68CR7 880 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 CRTC1Q6UUV9 634 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 CMTM8Q8IZV2 173 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 TNIP2Q8NFZ5 429 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 OSCP1Q8WVF1 389 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 MBD1Q9UIS9 605 aaPredicted RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 MAGEL2Q9UJ55 1249 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 A0A1W2PRU2 124 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 LOC730098B7Z3J9 87 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ARNTLO00327 626 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 FKTNO75072 461 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 SOCS5O75159 536 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ULK1O75385 1050 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 JAK1P23458 1154 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 SERPINA4P29622 427 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 CAPGP40121 348 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 CDK9P50750 372 aaKnown RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 SLC44A4Q53GD3 710 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 SLC39A5Q6ZMH5 540 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 MACC1Q6ZN28 852 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ANKRD33Q7Z3H0 272 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 SLC13A3Q8WWT9 602 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 FIG4Q92562 907 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 MRPS31Q92665 395 aaKnown RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 PPP3R2Q96LZ3 170 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 HTATIP2Q9BUP3 242 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 BDH2Q9BUT1 245 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 THUMPD3Q9BV44 507 aaKnown RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 TMEM45AQ9NWC5 275 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ZNHIT2Q9UHR6 403 aa16.78■□□□□ 0.28
PKD1-213ENST00000480227 ZNF490Q9ULM2 529 aaPredicted RBP16.78■□□□□ 0.28
PKD1-213ENST00000480227 RGS14O43566 566 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 KCNH1O95259 989 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 SRCP12931 536 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 FXNQ16595 210 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 ZIK1Q3SY52 487 aaPredicted RBP16.77■□□□□ 0.28
PKD1-213ENST00000480227 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 KRTCAP2Q8N6L1 136 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 CLHC1Q8NHS4 586 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 BPIFB1Q8TDL5 484 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 ZNF583Q96ND8 569 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 SPG21Q9NZD8 308 aa16.77■□□□□ 0.28
PKD1-213ENST00000480227 KIAA1522Q9P206 1035 aaPredicted RBP16.77■□□□□ 0.28
PKD1-213ENST00000480227 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.77■□□□□ 0.28
PKD1-213ENST00000480227 EIF3LQ9Y262 564 aaKnown RBP16.77■□□□□ 0.28
PKD1-213ENST00000480227 MAGED1Q9Y5V3 778 aaPredicted RBP16.77■□□□□ 0.28
PKD1-213ENST00000480227 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.27
PKD1-213ENST00000480227 TGM5O43548 720 aa16.77■□□□□ 0.27
PKD1-213ENST00000480227 SEC22BO75396 215 aa16.77■□□□□ 0.27
PKD1-213ENST00000480227 CDH1P12830 882 aa16.77■□□□□ 0.27
PKD1-213ENST00000480227 LHCGRP22888 699 aa16.77■□□□□ 0.27
PKD1-213ENST00000480227 YAP1P46937 504 aaKnown RBP16.77■□□□□ 0.27
PKD1-213ENST00000480227 KIAA0040Q15053 153 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms