RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 LOC100130705A0A1B0GUX0 176 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ZNF99A8MXY4 864 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ITIH1P19827 911 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 DUSP4Q13115 394 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SLC13A2Q13183 592 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PRKG2Q13237 762 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 DGCR6Q14129 220 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 LAPTM4AQ15012 233 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SF3B4Q15427 424 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ATP6AP1LQ52LC2 224 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 Q8N9G6 341 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 CGREF1Q99674 301 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SPON2Q9BUD6 331 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ERVK-18Q9QC07 812 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 LIMD1Q9UGP4 676 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PCTPQ9UKL6 214 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PCDHB5Q9Y5E4 795 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TYW5A2RUC4 315 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 DRGXA6NNA5 263 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 ZBBXA8MT70 800 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 MITFO75030 526 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 VPS4BO75351 444 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 GABARAPO95166 117 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PFKLP17858 780 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 SGSHP51688 502 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 HK3P52790 923 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PLEKHG7Q6ZR37 379 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TTC30BQ8N4P2 665 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 PJA1Q8NG27 643 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 RPL3LQ92901 407 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TBCDQ9BTW9 1192 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 EIF2B4Q9UI10 523 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-208ENST00000479530 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 BTN3A1O00481 513 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ADAM12O43184 909 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 OR1I1O60431 355 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 RHOBTB1O94844 696 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 UROSP10746 265 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 FMO3P31513 532 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 GGT5P36269 586 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 RAPSNQ13702 412 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 DEPDC1Q5TB30 811 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ATP6V0D2Q8N8Y2 350 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 PRDM8Q9NQV8 689 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 NAALAD2Q9Y3Q0 740 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 DYTNA2CJ06 578 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 M0R3G1 203 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 GNGT2O14610 69 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 PRAMEF11O60813 436 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 PRKD3O94806 890 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 HPRP00739 348 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ERVPABLB-1P60509 514 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 IL10RBQ08334 325 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 GRIK2Q13002 908 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 C18orf21Q32NC0 220 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 RGMBQ6NW40 437 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 GALNT5Q7Z7M9 940 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 DPP10Q8N608 796 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 OR4L1Q8NH43 312 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 CDKN2AIPNLQ96HQ2 116 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 PPP1R2P1Q96PQ5 205 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 BPIFA1Q9NP55 256 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ZIM2Q9NZV7 527 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 ADGRE2Q9UHX3 823 aa13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 PNMA8BQ9ULN7 279 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-208ENST00000479530 TLR5O60602 858 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 CYP4B1P13584 511 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 NAT1P18440 290 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 HOXD9P28356 352 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 STC1P52823 247 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 CDK5R2Q13319 367 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF235Q14590 738 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms