RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 KCNMB2Q9Y691 235 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 IGLV3-16A0A075B6K0 115 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 CCDC162PA2VCL2 907 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 OR1I1O60431 355 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 AP2A1O95782 977 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 SFTPCP11686 197 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 MSNP26038 577 aaKnown RBP16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 HSD11B2P80365 405 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 PDE1BQ01064 536 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 ACY1Q03154 408 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 SYCE1Q8N0S2 351 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 TTC13Q8NBP0 860 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 OR5AR1Q8NGP9 310 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 MR1Q95460 341 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 ZNF501Q96CX3 271 aaPredicted RBP16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 ZNF778Q96MU6 729 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 TRIM55Q9BYV6 548 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 ETNK1Q9HBU6 452 aa16.89■□□□□ 0.3
ECHDC1-216ENST00000479525 SPTA1P02549 2419 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 RELNP78509 3460 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 COL12A1Q99715 3063 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 MIF4GDA9UHW6 222 aaKnown RBP16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 CREG1O75629 220 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 ZBTB11O95625 1053 aaPredicted RBP16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 ZSCAN5DPP0CG00 497 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 FOXN2P32314 431 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 TERF1P54274 439 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 MC1RQ01726 317 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 PRKAA1Q13131 559 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 IL10RAQ13651 578 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 DEFB110Q30KQ9 67 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 LDB1Q86U70 411 aaPredicted RBP16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 FAM20CQ8IXL6 584 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 DNAAF3Q8N9W5 541 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 ACVR1CQ8NER5 493 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 OR1L3Q8NH93 324 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 STYXQ8WUJ0 223 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 POMT2Q9UKY4 750 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 COLEC10Q9Y6Z7 277 aa16.89■□□□□ 0.29
ECHDC1-216ENST00000479525 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 TMEM150CB9EJG8 249 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 IFRD1O00458 451 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 LIASO43766 372 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 PDGFAP04085 211 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 CTSBP07858 339 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 NDUFS1P28331 727 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 PRDX3P30048 256 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 CACNG1Q06432 222 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 SEMA3AQ14563 771 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 GPR33Q49SQ1 333 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 LACTB2Q53H82 288 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 LKAAEAR1Q8TD35 194 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 ELMO1Q92556 727 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 ALS2CR12Q96Q35 445 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 CD180Q99467 661 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 CHST8Q9H2A9 424 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 ICKQ9UPZ9 632 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 POLHQ9Y253 713 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 MAN2B2Q9Y2E5 1009 aa16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 TDRKHQ9Y2W6 561 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-216ENST00000479525 FLNBO75369 2602 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 H7C0S8 307 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 HCRTR1O43613 425 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 GOT2P00505 430 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 CSRP3P50461 194 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 TUBB4BP68371 445 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 OASLQ15646 514 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 P3H1Q32P28 736 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 PTCHD3Q3KNS1 767 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 PPP1R21Q6ZMI0 780 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 OR13J1Q8NGT2 312 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 LRRC45Q96CN5 670 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 FEZ2Q9UHY8 353 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 KCND3Q9UK17 655 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 ZNF148Q9UQR1 794 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 HEBP2Q9Y5Z4 205 aa16.87■□□□□ 0.29
ECHDC1-216ENST00000479525 C17orf113A0A1B0GUU1 675 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 MROH6A6NGR9 719 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 IQCF5A8MTL0 148 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 CPNE3O75131 537 aaKnown RBP16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 FOXL2P58012 376 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 CRADDP78560 199 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 KMT5CQ86Y97 462 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 SLC13A5Q86YT5 568 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 TMEM151BQ8IW70 566 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 ADGRF3Q8IZF5 1079 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 C2orf73Q8N5S3 287 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 CLIP3Q96DZ5 547 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 PPP1R2P1Q96PQ5 205 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 FAM60AQ9NP50 221 aa16.86■□□□□ 0.29
ECHDC1-216ENST00000479525 RAB6BQ9NRW1 208 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms