RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 FAM234BA2RU67 622 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 TFECO14948 347 aaPredicted RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PER2O15055 1255 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SUV39H1O43463 412 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 C8GP07360 202 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 DHRS4L1P0CG22 281 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ACRP10323 421 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ZNF12P17014 697 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SLC7A1P30825 629 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 NTSP30990 170 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 MAPK9P45984 424 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 GJA8P48165 433 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CES5AQ6NT32 575 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 OR10A6Q8NH74 314 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 EEF1AKMT1Q8WVE0 214 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SLC13A3Q8WWT9 602 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CCDC106Q9BWC9 280 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SMPD3Q9NY59 655 aaPredicted RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 GSTK1Q9Y2Q3 226 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 LRRC42Q9Y546 428 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ABCA3Q99758 1704 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ZCWPW2A0A1B0GU75 182 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 FEN1P39748 380 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 BEND5Q7L4P6 421 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CYP4Z2PQ8N1L4 340 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 GLB1L3Q8NCI6 653 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 MYDGFQ969H8 173 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 NACC2Q96BF6 587 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 WRAP53Q9BUR4 548 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 DERL2Q9GZP9 239 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CCNB1IP1Q9NPC3 277 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ANGPT4Q9Y264 503 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 GJB5O95377 273 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 OAS1P00973 400 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ITGB1P05556 798 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CD68P34810 354 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ASMTP46597 345 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 RPS9P46781 194 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CYP4F2P78329 520 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CYP4F3Q08477 520 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 CHRNA6Q15825 494 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 C17orf64Q86WR6 236 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 PHYKPLQ8IUZ5 450 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ZMIZ2Q8NF64 920 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ING5Q8WYH8 240 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 DHRS4Q9BTZ2 278 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 RAPGEFL1Q9UHV5 662 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 WBP11Q9Y2W2 641 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 M0QZQ0 153 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ITGA2P17301 1181 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 NR4A1P22736 598 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 SLC6A2P23975 617 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 AFF1P51825 1210 aaKnown RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ANKRD46Q86W74 232 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 C3orf58Q8NDZ4 430 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 MOCOSQ96EN8 888 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 PRR11Q96HE9 360 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-206ENST00000479501 FAIM2Q9BWQ8 316 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 IKZF3Q9UKT9 509 aa14.1□□□□□ -0.15
COL20A1-206ENST00000479501 ASLP04424 464 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 AQP1P29972 269 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 RPS14P62263 151 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CARD16Q5EG05 197 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 FAM171BQ6P995 826 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 FAM43BQ6ZT52 329 aaPredicted RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CEP97Q8IW35 865 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CFAP206Q8IYR0 622 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 ENDOVQ8N8Q3 282 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 PNPT1Q8TCS8 783 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CANT1Q8WVQ1 401 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 PEX13Q92968 403 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 TLE6Q9H808 572 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 PREBQ9HCU5 417 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 AQP12BA6NM10 295 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CLDN25C9JDP6 229 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 COCHO43405 550 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CLDN7O95471 211 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 NFATC1O95644 943 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 ANXA4P09525 319 aaPredicted RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 GCAP28676 217 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CAP1Q01518 475 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 QPRTQ15274 297 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 AQP12AQ8IXF9 295 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 DCAF4L2Q8NA75 395 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 LRRC58Q96CX6 371 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 GPATCH1Q9BRR8 931 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 GIN1Q9NXP7 522 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 H6PDO95479 791 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CKMT2P17540 419 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CDK9P50750 372 aaKnown RBP14.09□□□□□ -0.15
COL20A1-206ENST00000479501 MTPNP58546 118 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CDC42P60953 191 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 HMGCS1Q01581 520 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 ZNF678Q5SXM1 525 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
COL20A1-206ENST00000479501 NEK10Q6ZWH5 1172 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms