RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 UTP14AQ9BVJ6 771 aaKnown RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 SPRY4Q9C004 299 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 SEBOXQ9HB31 216 aaPredicted RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 ARHGEF38Q9NXL2 777 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 LOXL2Q9Y4K0 774 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 ZNF318Q5VUA4 2279 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 AK9Q5TCS8 1911 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 SH2B2O14492 632 aaPredicted RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 KCNN4O15554 427 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 UFL1O94874 794 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 TUBBP07437 444 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 MMP9P14780 707 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 LMO1P25800 156 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 APOBEC1P41238 236 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 PEX5P50542 639 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 STAT2P52630 851 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 BNC1Q01954 994 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 GRSF1Q12849 480 aaKnown RBP eCLIP4.89□□□□□ -1.63
RFC4-212ENST00000479307 CDC16Q13042 620 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 BAATQ14032 418 aaPredicted RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 VGLL4Q14135 290 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 DHX34Q14147 1143 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 SHHQ15465 462 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 CALCRLQ16602 461 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 XKR9Q5GH70 373 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 C9orf50Q5SZB4 431 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 GARNL3Q5VVW2 1013 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 NAA16Q6N069 864 aaPredicted RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 PAPD4Q6PIY7 484 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 BRAT1Q6PJG6 821 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 CCNI2Q6ZMN8 369 aaPredicted RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 KBTBD6Q86V97 674 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 DNAAF5Q86Y56 855 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 SCML4Q8N228 414 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 ELP5Q8TE02 316 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 RND1Q92730 232 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 GRAMD2BQ96HH9 432 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 CEP295NLQ96MC4 621 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 SEZ6LQ9BYH1 1024 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 SLC35C2Q9NQQ7 365 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.89□□□□□ -1.63
RFC4-212ENST00000479307 TRMT1Q9NXH9 659 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 DBNLQ9UJU6 430 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 PADI1Q9ULC6 663 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 TMEM184BQ9Y519 407 aaPredicted RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 SNX9Q9Y5X1 595 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.89□□□□□ -1.63
RFC4-212ENST00000479307 DOCK3Q8IZD9 2030 aa4.89□□□□□ -1.63
RFC4-212ENST00000479307 EPG5Q9HCE0 2579 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 A8MV72 311 aaPredicted RBP4.88□□□□□ -1.63
RFC4-212ENST00000479307 PROB1E7EW31 1015 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 P4HA2O15460 535 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 AVILO75366 819 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 GH2P01242 217 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 HMOX1P09601 288 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 CETPP11597 493 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 UGT1A1P22309 533 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 KRT20P35900 424 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 TAS2R38P59533 333 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 PSMC6P62333 389 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 LRRC26Q2I0M4 334 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 KCNT1Q5JUK3 1230 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 TMEM198Q66K66 360 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 ZNF280DQ6N043 979 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 SLC30A6Q6NXT4 461 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 WDR73Q6P4I2 378 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 TPRG1Q6ZUI0 275 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 CCDC190Q86UF4 302 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 MINDY1Q8N5J2 469 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 IQCF1Q8N6M8 205 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 SYT2Q8N9I0 419 aaPredicted RBP4.88□□□□□ -1.63
RFC4-212ENST00000479307 CAMK1GQ96NX5 476 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 TMEM204Q9BSN7 226 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 NOX4Q9NPH5 578 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 PAG1Q9NWQ8 432 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 C1RLQ9NZP8 487 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 BCCIPQ9P287 314 aaKnown RBP eCLIP4.88□□□□□ -1.63
RFC4-212ENST00000479307 CPSF2Q9P2I0 782 aaKnown RBP4.88□□□□□ -1.63
RFC4-212ENST00000479307 DNAJB4Q9UDY4 337 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 PTRH2Q9Y3E5 179 aaKnown RBP4.88□□□□□ -1.63
RFC4-212ENST00000479307 NFS1Q9Y697 457 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 SH3TC1Q8TE82 1336 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 MED23Q9ULK4 1368 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 PLXNB2O15031 1838 aa4.88□□□□□ -1.63
RFC4-212ENST00000479307 RLFQ13129 1914 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 LNP1A1A4G5 178 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 FAM90A26D6RGX4 464 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 PI4K2BG5E9Z4 385 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 ADAM20O43506 726 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 ADRB2P07550 413 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 TRIM21P19474 475 aaKnown RBP4.87□□□□□ -1.63
RFC4-212ENST00000479307 SSTR2P30874 369 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 HOXA11P31270 313 aaPredicted RBP4.87□□□□□ -1.63
RFC4-212ENST00000479307 ARSEP51690 589 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 SEC61A1P61619 476 aaKnown RBP4.87□□□□□ -1.63
RFC4-212ENST00000479307 SPOCK1Q08629 439 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 TRAF3Q13114 568 aa4.87□□□□□ -1.63
RFC4-212ENST00000479307 MVPQ14764 893 aaKnown RBP4.87□□□□□ -1.63
RFC4-212ENST00000479307 PAPPA-AS1Q5QFB9 102 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms