RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 UNC5DQ6UXZ4 953 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 MICALCLQ6ZW33 695 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 LDB1Q86U70 411 aaPredicted RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 ZNF761Q86XN6 746 aaPredicted RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 FBXO39Q8N4B4 442 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 MMGT1Q8N4V1 131 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 NAT14Q8WUY8 206 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 ZCCHC14Q8WYQ9 949 aaKnown RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 NCSTNQ92542 709 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 FGF11Q92914 225 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 THSD1Q9NS62 852 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 C20orf96Q9NUD7 363 aaPredicted RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 FBXO5Q9UKT4 447 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 SNX24Q9Y343 169 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 PCDHGA3Q9Y5H0 932 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 BRINP1O60477 761 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 RPN2P04844 631 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 MPOP05164 745 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 PKMP14618 531 aaKnown RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 RBMS1P29558 406 aaKnown RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 ELK3P41970 407 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 C2orf54Q08AI8 447 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 GLE1Q53GS7 698 aaKnown RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 CTSL3PQ5NE16 218 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 PHF19Q5T6S3 580 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 OTOAQ7RTW8 1153 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 PRSS42Q7Z5A4 293 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 KCNMB4Q86W47 210 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 KMT5CQ86Y97 462 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 IGDCC3Q8IVU1 814 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 OTUD6BQ8N6M0 293 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 C2CD4AQ8NCU7 369 aaPredicted RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 OR5K2Q8NHB8 316 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 KCNJ9Q92806 393 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 ART4Q93070 314 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 CERS2Q96G23 380 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 C9orf72Q96LT7 481 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 CCDC74BQ96LY2 380 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 TRIM56Q9BRZ2 755 aaKnown RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 TRIM31Q9BZY9 425 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 PLAC1Q9HBJ0 212 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 GRHL1Q9NZI5 618 aa15.07■□□□□ 0
C9orf3-217ENST00000479161 ZC3H7BQ9UGR2 993 aaKnown RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 CORO1CQ9ULV4 474 aaPredicted RBP15.07■□□□□ 0
C9orf3-217ENST00000479161 UBA6A0AVT1 1052 aaPredicted RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 OR5K3A6NET4 321 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 GOLGA8KD6RF30 607 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 GOLGA8TH3BQL2 631 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 EIF3FO00303 357 aaPredicted RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 CAPN5O15484 640 aaPredicted RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 GSTA2P09210 222 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 CD82P27701 267 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 CSTF2P33240 577 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■□□□ 12.7
C9orf3-217ENST00000479161 MAPK9P45984 424 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 PREPP48147 710 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 EIF3BP55884 814 aaKnown RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 KRT33BQ14525 404 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 C16orf72Q14CZ0 275 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 SYTL3Q4VX76 610 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 HSP90AA5PQ58FG0 334 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 C3orf38Q5JPI3 329 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 UNC5AQ6ZN44 842 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 NEK10Q6ZWH5 1172 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 OOSP2Q86WS3 158 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 MDM1Q8TC05 714 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 KLHL6Q8WZ60 621 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 UBXN4Q92575 508 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 FERD3LQ96RJ6 166 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 ZPBPQ9BS86 351 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 TRIT1Q9H3H1 467 aaKnown RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 ZNF768Q9H5H4 540 aaKnown RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 FBXO8Q9NRD0 319 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 MOCS1Q9NZB8 636 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
C9orf3-217ENST00000479161 CFAP20Q9Y6A4 193 aaKnown RBP15.06■□□□□ 0
C9orf3-217ENST00000479161 ZZEF1O43149 2961 aa15.05■□□□□ 0
C9orf3-217ENST00000479161 A0A087WV48 116 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 PRAMEF33A0A0G2JMD5 474 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 IQCF5A8MTL0 148 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.05■□□□□ -0
C9orf3-217ENST00000479161 TAF4O00268 1085 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 JMJD7P0C870 316 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 FMO4P31512 558 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 SKIV2L2P42285 1042 aaKnown RBP15.05■□□□□ -0
C9orf3-217ENST00000479161 SLC1A2P43004 574 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 RAB15P59190 212 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 HSPA14Q0VDF9 509 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 PDIA2Q13087 525 aaKnown RBP15.05■□□□□ -0
C9orf3-217ENST00000479161 CTBP1Q13363 440 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 PLCL1Q15111 1095 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 TMEM164Q5U3C3 297 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 C8orf74Q6P047 294 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 CYB5D1Q6P9G0 228 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 DENND6AQ8IWF6 608 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 BMPERQ8N8U9 685 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 RSC1A1Q92681 617 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 TEFMQ96QE5 360 aaKnown RBP15.05■□□□□ -0
C9orf3-217ENST00000479161 TAAR9Q96RI9 348 aa15.05■□□□□ -0
C9orf3-217ENST00000479161 WDR83Q9BRX9 315 aaKnown RBP15.05■□□□□ -0
C9orf3-217ENST00000479161 DDA1Q9BW61 102 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms