RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CYP4F3Q08477 520 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 FRG1Q14331 258 aaKnown RBP19.97■□□□□ 0.79
VARS-224ENST00000479051 GLE1Q53GS7 698 aaKnown RBP19.97■□□□□ 0.79
VARS-224ENST00000479051 PLEKHS1Q5SXH7 462 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 ARMC6Q6NXE6 501 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 FOXR1Q6PIV2 292 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 ZNF574Q6ZN55 896 aaPredicted RBP19.97■□□□□ 0.79
VARS-224ENST00000479051 KIAA0408Q6ZU52 694 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 OOSP2Q86WS3 158 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 TBC1D21Q8IYX1 336 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 SLC22A15Q8IZD6 547 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 C2CD4AQ8NCU7 369 aaPredicted RBP19.97■□□□□ 0.79
VARS-224ENST00000479051 ZDHHC12Q96GR4 267 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 CNTNAP3BQ96NU0 1288 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 CNTNAP3Q9BZ76 1288 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 PHACTR1Q9C0D0 580 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 SAYSD1Q9NPB0 183 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 DKK4Q9UBT3 224 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 POLG2Q9UHN1 485 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 LOXL2Q9Y4K0 774 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 BHMG1C9JSJ3 638 aaPredicted RBP19.96■□□□□ 0.79
VARS-224ENST00000479051 PLD2O14939 933 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 GPC4O75487 556 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 CSTF2P33240 577 aaKnown RBP eCLIP19.96■□□□□ 0.79
VARS-224ENST00000479051 MLLT3P42568 568 aaPredicted RBP19.96■□□□□ 0.79
VARS-224ENST00000479051 CARSP49589 748 aaKnown RBP19.96■□□□□ 0.79
VARS-224ENST00000479051 TTLL9Q3SXZ7 439 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 SNAP47Q5SQN1 464 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 CNTN4Q8IWV2 1026 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 PALM2Q8IXS6 379 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 UNC5BQ8IZJ1 945 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 LCN9Q8WX39 176 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 ZCCHC14Q8WYQ9 949 aaKnown RBP19.96■□□□□ 0.79
VARS-224ENST00000479051 PDP2Q9P2J9 529 aa19.96■□□□□ 0.79
VARS-224ENST00000479051 MN1Q10571 1320 aaPredicted RBP19.96■□□□□ 0.79
VARS-224ENST00000479051 CAPN5O15484 640 aaPredicted RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 BRINP1O60477 761 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 NIPSNAP2O75323 286 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 SLCO2B1O94956 709 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 MPSTP25325 297 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 ACADLP28330 430 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 LEPRP48357 1165 aaKnown RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 MPP1Q00013 466 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 GUCY2DQ02846 1103 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 PRKAA1Q13131 559 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 FASTKD3Q14CZ7 662 aaKnown RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 ZNF789Q5FWF6 425 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 IRGCQ6NXR0 463 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 CEP128Q6ZU80 1094 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 AGBL5Q8NDL9 886 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 PHC3Q8NDX5 983 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 MDM1Q8TC05 714 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 FBXO25Q8TCJ0 367 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 SKA2Q8WVK7 121 aaPredicted RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 JPH3Q8WXH2 748 aaPredicted RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 RSC1A1Q92681 617 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 FOPNLQ96NB1 174 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 TGM7Q96PF1 710 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 WDR83Q9BRX9 315 aaKnown RBP19.95■□□□□ 0.78
VARS-224ENST00000479051 HGH1Q9BTY7 390 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 FAM129AQ9BZQ8 928 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 RAB33BQ9H082 229 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 SRMSQ9H3Y6 488 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 FAM114A2Q9NRY5 505 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 THSD1Q9NS62 852 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 OGFRQ9NZT2 677 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 TMEM9Q9P0T7 183 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 EPHA6Q9UF33 1036 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 KLHL3Q9UH77 587 aa19.95■□□□□ 0.78
VARS-224ENST00000479051 DXOO77932 396 aaKnown RBP19.94■□□□□ 0.78
VARS-224ENST00000479051 ATP5DP30049 168 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 MGAT5Q09328 741 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 C16orf72Q14CZ0 275 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 TTC23LQ6PF05 361 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 IGF2-ASQ6U949 168 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 UNC5DQ6UXZ4 953 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 GALNT7Q86SF2 657 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 CCDC25Q86WR0 208 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 ZBTB2Q8N680 514 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 KDF1Q8NAX2 398 aaPredicted RBP19.94■□□□□ 0.78
VARS-224ENST00000479051 NOA1Q8NC60 698 aaKnown RBP19.94■□□□□ 0.78
VARS-224ENST00000479051 RCBTB1Q8NDN9 531 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 OR5K2Q8NHB8 316 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 KCNJ9Q92806 393 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 TFB2MQ9H5Q4 396 aaKnown RBP19.94■□□□□ 0.78
VARS-224ENST00000479051 HRASLS2Q9NWW9 162 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 ZFATQ9P243 1243 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 KLHL42Q9P2K6 505 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 CDYLQ9Y232 598 aa19.94■□□□□ 0.78
VARS-224ENST00000479051 OR6C74A6NCV1 312 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 OR5K3A6NET4 321 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 A8MU76 341 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 MATN2O00339 956 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 TOX3O15405 576 aaPredicted RBP19.93■□□□□ 0.78
VARS-224ENST00000479051 VPS26AO75436 327 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 RASSF9O75901 435 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 HAUS5O94927 633 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 C9P02748 559 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 GFERP55789 205 aa19.93■□□□□ 0.78
VARS-224ENST00000479051 ABRQ12979 859 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms