RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 KERAO60938 352 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SUPT3HO75486 399 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 NDUFS3O75489 264 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SOAT2O75908 522 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RHOBTB1O94844 696 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CDK14O94921 469 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ATE1O95260 518 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TNFAIP8O95379 198 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MATN4O95460 622 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 HMBSP08397 361 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 FAM58BPP0C7Q3 252 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SMIM18P0DKX4 95 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GFAPP14136 432 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CD1EP15812 388 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LBPP18428 481 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CD9P21926 228 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GPX3P22352 226 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PMLP29590 882 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SLC7A1P30825 629 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TRHRP34981 398 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ACVRL1P37023 503 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SLC11A2P49281 568 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MRPL19P49406 292 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF140P52738 457 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 STC1P52823 247 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PLK1P53350 603 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ACLYP53396 1101 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RHDQ02161 417 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GNA12Q03113 381 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RAD51Q06609 339 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 BNIP2Q12982 314 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GRIK2Q13002 908 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 DYNC1I2Q13409 638 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GALNT3Q14435 633 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 IHHQ14623 411 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TAF1AQ15573 450 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RAB30Q15771 203 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 KIF19Q2TAC6 998 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CNPY1Q3B7I2 92 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 UGT3A2Q3SY77 523 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PABPC1LQ4VXU2 614 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 KANK2Q63ZY3 851 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ANKS6Q68DC2 871 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 NAIF1Q69YI7 327 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 NADSYN1Q6IA69 706 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MRM1Q6IN84 353 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 FUT10Q6P4F1 479 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF549Q6P9A3 640 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CHST9Q7L1S5 443 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TMPRSS7Q7RTY8 843 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SPATA19Q7Z5L4 167 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LDB1Q86U70 411 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PIM3Q86V86 326 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CIR1Q86X95 450 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MIB1Q86YT6 1006 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LGI2Q8N0V4 545 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MIER2Q8N344 545 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 FBXO39Q8N4B4 442 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 NKAPQ8N5F7 415 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PCDH20Q8N6Y1 951 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RNF148Q8N7C7 305 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 C19orf47Q8N9M1 422 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ATAD1Q8NBU5 361 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 STAG3L4Q8TBR4 150 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF483Q8TF39 744 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 DDI1Q8WTU0 396 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TWIST2Q8WVJ9 160 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 OVCA2Q8WZ82 227 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LPGAT1Q92604 370 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 EXT2Q93063 718 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 KIAA1191Q96A73 305 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PTERQ96BW5 349 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CDKN2AIPNLQ96HQ2 116 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GLT1D1Q96MS3 346 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 KLHL32Q96NJ5 620 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PSKH2Q96QS6 385 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ATOH8Q96SQ7 321 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SEPT5Q99719 369 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PKP2Q99959 881 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SH3GL3Q99963 347 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM175Q9BSA9 504 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SPATA16Q9BXB7 569 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 C1QTNF3Q9BXJ4 246 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 BRINP2Q9C0B6 783 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MUC13Q9H3R2 512 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SUDS3Q9H7L9 328 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TNFRSF12AQ9NP84 129 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MID1IP1Q9NPA3 183 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 POLR3BQ9NW08 1133 aaPredicted RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM45AQ9NWC5 275 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GID8Q9NWU2 228 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TAS2R13Q9NYV9 303 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CCDC167Q9P0B6 97 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 REV1Q9UBZ9 1251 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms