RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RAB19A4D1S5 217 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 E5RI56 91 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 XYLBO75191 536 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 CLIC3O95833 236 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 RRASP10301 218 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 AKAP5P24588 427 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 FASP25445 335 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 GTF2E2P29084 291 aaKnown RBP12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 GMPRP36959 345 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 RPS9P46781 194 aaKnown RBP12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 ATXN3P54252 364 aaPredicted RBP12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 ORC1Q13415 861 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 GRM7Q14831 915 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 CLCA4Q14CN2 919 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 GRK1Q15835 563 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 CA9Q16790 459 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM76BQ5HYJ3 339 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 CLLU1Q5K131 121 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 CXCL17Q6UXB2 119 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 STRADAQ7RTN6 431 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 PLD3Q8IV08 490 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 TIGD4Q8IY51 512 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 PDIK1LQ8N165 341 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 TBC1D19Q8N5T2 526 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 EXOC2Q96KP1 924 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 DGCR6LQ9BY27 220 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 MALT1Q9UDY8 824 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 GABRQQ9UN88 632 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 LIPT1Q9Y234 373 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 TRPV2Q9Y5S1 764 aa12.46□□□□□ -0.42
RTFDC1-207ENST00000477573 SMIM28A0A1B0GU29 152 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM92AA1XBS5 289 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 MYADML2A6NDP7 307 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 BTN3A3O00478 584 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TRIM24O15164 1050 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 LYPLA1O75608 230 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 RHOBTB1O94844 696 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CCNDBP1O95273 360 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TSPAN12O95859 305 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ITGB1P05556 798 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 HLA-DMAP28067 261 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 HNF4AP41235 474 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 GARSP41250 739 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC15A1P46059 708 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 AKR1D1P51857 326 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TAS2R40P59535 323 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ADAM15Q13444 863 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 XKR4Q5GH76 650 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 FBXO47Q5MNV8 452 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 C5orf46Q6UWT4 87 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 DPH6Q7L8W6 267 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 R3HCC1LQ7Z5L2 792 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ZNF366Q8N895 744 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CLRN3Q8NCR9 226 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TBATAQ96M53 351 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ZIC5Q96T25 663 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 NXF2Q9GZY0 626 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CD274Q9NZQ7 290 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SFMBT1Q9UHJ3 866 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 RAPGEFL1Q9UHV5 662 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 AP4E1Q9UPM8 1137 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TCRBV9S1A1TA0A576 114 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 METTL15A6NJ78 407 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 AP3D1O14617 1153 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TBC1D4O60343 1298 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 PGK1P00558 417 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC2A4P14672 509 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 PCMT1P22061 227 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 PSMA2P25787 234 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ACVR2AP27037 513 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CREMQ03060 361 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 PRKCZQ05513 592 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TRAF3Q13114 568 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CBLBQ13191 982 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CAMK1Q14012 370 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SV2CQ496J9 727 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 HSD17B12Q53GQ0 312 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TPRG1LQ5T0D9 272 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 UBXN11Q5T124 520 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM182AQ5T1J6 154 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 DENND5AQ6IQ26 1287 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 RRM2BQ7LG56 351 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 XYLT1Q86Y38 959 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ZMIZ2Q8NF64 920 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ASB12Q8WXK4 309 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 FATE1Q969F0 183 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 AP2M1Q96CW1 435 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms