RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PIGGQ5H8A4 983 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 OR4F3Q6IEY1 312 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 KBTBD6Q86V97 674 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 PROSER1Q86XN7 944 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ZCCHC7Q8N3Z6 543 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TMEM199Q8N511 208 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 KLK6Q92876 244 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 NSMCE3Q96MG7 304 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 APOL4Q9BPW4 351 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 C11orf84Q9BUA3 381 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 DMTF1Q9Y222 760 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 INSL5Q9Y5Q6 135 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 CFAP20Q9Y6A4 193 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 MYO10Q9HD67 2058 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 MAGP20916 626 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RRM2P31350 389 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RING1Q06587 406 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 SGCGQ13326 291 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 CPTPQ5TA50 214 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 CWF19L1Q69YN2 538 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 ANKRD26P1Q6NSI1 321 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 NANOGP8Q6NSW7 305 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 GALNT15Q8N3T1 639 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 ARRDC2Q8TBH0 407 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 KCNJ9Q92806 393 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 NELL1Q92832 810 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RIOK2Q9BVS4 552 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 GSTO2Q9H4Y5 243 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 MRM3Q9HC36 420 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 TREX1Q9NSU2 369 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 FNIP2Q9P278 1114 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 MAP4K5Q9Y4K4 846 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 CXCR6O00574 342 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RSL1D1O76021 490 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 CPOXP36551 454 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 APLP1P51693 650 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 HPCAP84074 193 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 CYP2U1Q7Z449 544 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 KRTCAP2Q8N6L1 136 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 TRPV3Q8NET8 790 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 ATL1Q8WXF7 558 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 NACC2Q96BF6 587 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RNF38Q9H0F5 515 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 DDX28Q9NUL7 540 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 IMP3Q9NV31 184 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 PRKAB1Q9Y478 270 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 DFNA5O60443 496 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 VARSP26640 1264 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 GRK3P35626 688 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 HNF1BP35680 557 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 PREPP48147 710 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 GK3PQ14409 553 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 XKR4Q5GH76 650 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 LYPLAL1Q5VWZ2 237 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 DPY19L3Q6ZPD9 716 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 SH2D5Q6ZV89 423 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 C2orf15Q8WU43 125 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 FUBP1Q96AE4 644 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 YIPF2Q9BWQ6 316 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 NUSAP1Q9BXS6 441 aaKnown RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 RHBGQ9H310 441 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 KRT84Q9NSB2 600 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 PDP1Q9P0J1 537 aaPredicted RBP10.82□□□□□ -0.68
COL27A1-204ENST00000477421 B4GALT6Q9UBX8 382 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
COL27A1-204ENST00000477421 TAF1LQ8IZX4 1826 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TOR1BO14657 336 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 OPN1SWP03999 348 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PGRP06401 933 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PABPC1P11940 636 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 CSF2RAP15509 400 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 IST1P53990 364 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 NFATC2Q13469 925 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PLEKHG6Q3KR16 790 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 FAM124AQ86V42 546 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 LSMEM2Q8N112 164 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PGBD5Q8N414 524 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 MDGA1Q8NFP4 955 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 BIRC7Q96CA5 298 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 BBS4Q96RK4 519 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 GORASP1Q9BQQ3 440 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 FANCEQ9HB96 536 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PLAC1Q9HBJ0 212 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TRIP11Q15643 1979 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 COL11A2P13942 1736 aaPredicted RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 CNOT3O75175 753 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 FDXRP22570 491 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 RPL10P27635 214 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 LY6G5CQ5SRR4 150 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SDE2Q6IQ49 451 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 OGFOD2Q6N063 350 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 RTN4RL1Q86UN2 441 aaPredicted RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TRIM48Q8IWZ4 208 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SETD9Q8NE22 299 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 OR7A2PQ8NGA2 310 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TMBIM1Q969X1 311 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms