RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 DLEU7Q6UYE1 221 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 RANBP10Q6VN20 620 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 HORMAD1Q86X24 394 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 METTL4Q8N3J2 472 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 CNIH3Q8TBE1 160 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 PIK3R3Q92569 461 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 TTC9Q92623 222 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 C18orf25Q96B23 403 aaPredicted RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 TBC1D20Q96BZ9 403 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 APOL4Q9BPW4 351 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 LPIN3Q9BQK8 851 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ITPAQ9BY32 194 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 A0A1W2PQY0 241 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 OR2A25A4D2G3 310 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 PPEF2O14830 753 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 SPNP16150 400 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CD36P16671 472 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 MZF1P28698 734 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 CYP2C18P33260 490 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 HTR7P34969 479 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 PNPLA4P41247 253 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 MAP2K4P45985 399 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 KCNC1P48547 511 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 SEPHS1P49903 392 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CDKN2DP55273 166 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TRIP4Q15650 581 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 ATP6AP1LQ52LC2 224 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ZNF789Q5FWF6 425 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TPRG1LQ5T0D9 272 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ANKS6Q68DC2 871 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TMEM207Q6UWW9 146 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CCDC81Q6ZN84 652 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 OR2T12Q8NG77 320 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 SUN5Q8TC36 379 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 EXT2Q93063 718 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TEX37Q96LM6 180 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ZNF599Q96NL3 588 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ATOH8Q96SQ7 321 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CCDC32Q9BV29 185 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 HEBP1Q9NRV9 189 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TRMT13Q9NUP7 481 aaKnown RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 IL37Q9NZH6 218 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TMEFF2Q9UIK5 374 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 WBP11Q9Y2W2 641 aaKnown RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 PEX16Q9Y5Y5 336 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 CENPXA8MT69 81 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 GPR182O15218 404 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 MLYCDO95822 493 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 RETP07949 1114 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 RPS17P08708 135 aaKnown RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 PRIM2P49643 509 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CSNK2BP67870 215 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 RAPSNQ13702 412 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ZBTB6Q15916 424 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CARTPTQ16568 116 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 TYSND1Q2T9J0 566 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 BRMS1LQ5PSV4 323 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 PM20D1Q6GTS8 502 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15□□□□□ -0.01
CLSTN1-205ENST00000477264 NAT16Q8N8M0 369 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 SETD6Q8TBK2 473 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 DEPDC7Q96QD5 511 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 KCNA7Q96RP8 456 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 C1QTNF3Q9BXJ4 246 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 RGS18Q9NS28 235 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CDH9Q9ULB4 789 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 ST3GAL5Q9UNP4 418 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 CAB39Q9Y376 341 aaPredicted RBP15□□□□□ -0.01
CLSTN1-205ENST00000477264 MAU2Q9Y6X3 613 aa15□□□□□ -0.01
CLSTN1-205ENST00000477264 A6NL46 340 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 MATN3O15232 486 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 KERAO60938 352 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 FADS2O95864 444 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 EFNA1P20827 205 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 IGFBP5P24593 272 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 SOX11P35716 441 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 PPP3CCP48454 512 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 OR2B6P58173 313 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 PFKFB4Q16877 469 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 FBXO47Q5MNV8 452 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 C9orf57Q5W0N0 161 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 RALGPS2Q86X27 583 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 UBQLNLQ8IYU4 475 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 ZNF548Q8NEK5 533 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 NDRG1Q92597 394 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 MRGPRX2Q96LB1 330 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 DDX28Q9NUL7 540 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 NYNRINQ9P2P1 1898 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-205ENST00000477264 ANKRD12Q6UB98 2062 aa14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 STX16O14662 325 aa14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 RECQL4O94761 1208 aa14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 MFN2O95140 757 aa14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 SIX3O95343 332 aaPredicted RBP14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 CRYZL1O95825 349 aa14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 MYCP01106 439 aaPredicted RBP14.98□□□□□ -0.01
CLSTN1-205ENST00000477264 MTHFD2P13995 350 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms