RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 KIR3DX1Q9H7L2 352 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 NLRC4Q9NPP4 1024 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 FAM8A1Q9UBU6 413 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 HCFC1P51610 2035 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 GTF3C1Q12789 2109 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 PES1O00541 588 aaKnown RBP14.8□□□□□ -0.04
SMG5-204ENST00000476954 EPHB6O15197 1021 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 ZNHIT1O43257 154 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 PRPSAP2O60256 369 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 HLA-DQB2P05538 268 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 MMP2P08253 660 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 TCF4P15884 667 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 TNFSF10P50591 281 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 JAM2P57087 298 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 PRKAA1Q13131 559 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 GTF2H3Q13889 308 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.8□□□□□ -0.04
SMG5-204ENST00000476954 ATP13A5Q4VNC0 1218 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 PDPK2PQ6A1A2 396 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 POLNQ7Z5Q5 900 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 FAM20CQ8IXL6 584 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 ELOA2Q8IYF1 753 aaPredicted RBP14.8□□□□□ -0.04
SMG5-204ENST00000476954 GPR135Q8IZ08 494 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 CHDHQ8NE62 594 aaPredicted RBP14.8□□□□□ -0.04
SMG5-204ENST00000476954 CSPG4P5Q96PW8 444 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 FOXC2Q99958 501 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 TUBGCP2Q9BSJ2 902 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 AP1M1Q9BXS5 423 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 ZWILCHQ9H900 591 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 CCM2LQ9NUG4 571 aaPredicted RBP14.8□□□□□ -0.04
SMG5-204ENST00000476954 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMG5-204ENST00000476954 ABI3Q9P2A4 366 aa14.8□□□□□ -0.04
SMG5-204ENST00000476954 NFKBIL1Q9UBC1 381 aaPredicted RBP14.8□□□□□ -0.04
SMG5-204ENST00000476954 OR2AG2A6NM03 316 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 BTN3A1O00481 513 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 GPR39O43194 453 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 ITGAXP20702 1163 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 IL1R2P27930 398 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 GABRA4P48169 554 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 CASP6P55212 293 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 POLR2FP61218 127 aaKnown RBP14.79□□□□□ -0.04
SMG5-204ENST00000476954 RBPJQ06330 500 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 MAMLD1Q13495 774 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 TMC3Q7Z5M5 1100 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 TRIM73Q86UV7 250 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 MCOLN2Q8IZK6 566 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 ZNF655Q8N720 491 aaPredicted RBP14.79□□□□□ -0.04
SMG5-204ENST00000476954 BEND7Q8N7W2 519 aaPredicted RBP14.79□□□□□ -0.04
SMG5-204ENST00000476954 ZFPM2Q8WW38 1151 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 MAML1Q92585 1016 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 RMDN2Q96LZ7 410 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 BPIFA1Q9NP55 256 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 MEMO1Q9Y316 297 aa14.79□□□□□ -0.04
SMG5-204ENST00000476954 CPAMD8Q8IZJ3 1885 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 TRAV17A0A0B4J275 112 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 AURKAO14965 403 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 KCNJ13O60928 360 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 CD63P08962 238 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 DESP17661 470 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 CA4P22748 312 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 ARL4AP40617 200 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 CD86P42081 329 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 ZIC1Q15915 447 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 INAQ16352 499 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 TUBB8Q3ZCM7 444 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 METRNLQ641Q3 311 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 TMEM220Q6QAJ8 160 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 TMEM200AQ86VY9 491 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 OR11G2Q8NGC1 345 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 PROKR1Q8TCW9 393 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 VPS35Q96QK1 796 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 TAS2R14Q9NYV8 317 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 PTGFRNQ9P2B2 879 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 ZNF711Q9Y462 761 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 AP1M2Q9Y6Q5 423 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 ATRQ13535 2644 aa14.78□□□□□ -0.04
SMG5-204ENST00000476954 MFSD11O43934 449 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 ZNF135P52742 658 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 DPYSL2Q16555 572 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 LONRF1Q17RB8 773 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 TXNRD3NBQ6F5E7 133 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 PSTKQ8IV42 348 aaKnown RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 LILRA3Q8N6C8 439 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 AMER2Q8N7J2 671 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 TEKT4Q8WW24 435 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 PSMF1Q92530 271 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 HSPH1Q92598 858 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 N4BP2L2Q92802 583 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 TTC25Q96NG3 672 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 SPSB2Q99619 263 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 GPR63Q9BZJ6 419 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 SRMSQ9H3Y6 488 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 SOX17Q9H6I2 414 aaPredicted RBP14.77□□□□□ -0.05
SMG5-204ENST00000476954 TXLNGQ9NUQ3 528 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.05
SMG5-204ENST00000476954 C17orf113A0A1B0GUU1 675 aa14.76□□□□□ -0.05
SMG5-204ENST00000476954 DYTNA2CJ06 578 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms