RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SPATA22Q8NHS9 363 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 DNAJB14Q8TBM8 379 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 PTERQ96BW5 349 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 AGAP3Q96P47 875 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 GBP5Q96PP8 586 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 NRTNQ99748 197 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 SLX1AQ9BQ83 275 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 KLHL25Q9H0H3 589 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 SRMSQ9H3Y6 488 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-213ENST00000476777 COLEC10Q9Y6Z7 277 aa11.01□□□□□ -0.65
BRCA1-213ENST00000476777 BTN3A3O00478 584 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 BTN3A1O00481 513 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 GAPDHSO14556 408 aaPredicted RBP11□□□□□ -0.65
BRCA1-213ENST00000476777 CYP1A2P05177 515 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 UMODP07911 640 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 SLC35G4P0C7Q5 338 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 PVRP15151 417 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 NDUFS1P28331 727 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 PTGER4P35408 488 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 SPAM1P38567 509 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 AP1B1Q10567 949 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 CDC16Q13042 620 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 AIMP2Q13155 320 aaKnown RBP11□□□□□ -0.65
BRCA1-213ENST00000476777 NOMO1Q15155 1222 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 PPP2R5EQ16537 467 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 LONRF2Q1L5Z9 754 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 C1orf189Q5VU69 101 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 CCDC70Q6NSX1 233 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 RHBDD2Q6NTF9 364 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 DET1Q7L5Y6 550 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 MAP7D3Q8IWC1 876 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 LILRA3Q8N6C8 439 aaPredicted RBP11□□□□□ -0.65
BRCA1-213ENST00000476777 PLD5Q8N7P1 536 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 COG1Q8WTW3 980 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 NAT14Q8WUY8 206 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 LCN9Q8WX39 176 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 RELTQ969Z4 430 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF830Q96NB3 372 aaPredicted RBP11□□□□□ -0.65
BRCA1-213ENST00000476777 TRABDQ9H4I3 376 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 SMOXQ9NWM0 555 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11□□□□□ -0.65
BRCA1-213ENST00000476777 IL17CQ9P0M4 197 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 FAM8A1Q9UBU6 413 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 GPN3Q9UHW5 284 aaPredicted RBP11□□□□□ -0.65
BRCA1-213ENST00000476777 CDYLQ9Y232 598 aa11□□□□□ -0.65
BRCA1-213ENST00000476777 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 CCDC66A2RUB6 948 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 KLHL33A6NCF5 533 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 AGPSO00116 658 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 MAP3K7O43318 606 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 PMPCBO75439 489 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 CD63P08962 238 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 MSH3P20585 1137 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 TAS2R40P59535 323 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 DCDP81605 110 aaKnown RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF169Q14929 603 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 CYP2A13Q16696 494 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 AGAP7PQ5VUJ5 663 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 B3GNTL1Q67FW5 361 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 GPR135Q8IZ08 494 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 PROKR1Q8TCW9 393 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 RAPGEF5Q92565 580 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 CNDP1Q96KN2 507 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 AGAP4Q96P64 663 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 RNF157Q96PX1 679 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 SPRTNQ9H040 489 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 GLOD4Q9HC38 313 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 FAM60AQ9NP50 221 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 UBP1Q9NZI7 540 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 IFT80Q9P2H3 777 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-213ENST00000476777 NDOR1Q9UHB4 597 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 FBXL4Q9UKA2 621 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 ITGB1BP2Q9UKP3 347 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 HEBP2Q9Y5Z4 205 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 AP1M2Q9Y6Q5 423 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 NUP210LQ5VU65 1888 aa10.99□□□□□ -0.65
BRCA1-213ENST00000476777 LOC285095A0A1B0GVY8 99 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 HCRTR1O43613 425 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 SGTAO43765 313 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 ALOX12BO75342 701 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 OR2B3O76000 313 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 POLBP06746 335 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 AKT1P31749 480 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 GABRA4P48169 554 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 OTUD4Q01804 1114 aaKnown RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 ITGA9Q13797 1035 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 KRT33BQ14525 404 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 SLC9A5Q14940 896 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 TLR1Q15399 786 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 TESK1Q15569 626 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 NKAIN1Q4KMZ8 207 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 BCL7AQ4VC05 210 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 ZFYVE27Q5T4F4 411 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms