RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 AQP5P55064 265 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 PFN3P60673 137 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 PLOD1Q02809 727 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-211ENST00000476772 GALNT1Q10472 559 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-211ENST00000476772 SULT1C3Q6IMI6 304 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 CUZD1Q86UP6 607 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 CAMKK1Q8N5S9 505 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 TMEM145Q8NBT3 493 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 ZNF483Q8TF39 744 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-211ENST00000476772 RMDN2Q96LZ7 410 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 TRIM54Q9BYV2 358 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 FGF22Q9HCT0 170 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 ARL15Q9NXU5 204 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 MOSPD1Q9UJG1 213 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 SUFUQ9UMX1 484 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-211ENST00000476772 CLCQ05315 142 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 NFATC4Q14934 902 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 PCBP2Q15366 365 aaKnown RBP eCLIP28.19■■■□□ 2.11e-10■■□□□ 11.4
VEGFA-211ENST00000476772 MAVSQ7Z434 540 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 TMEM79Q9BSE2 394 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 DPEP2Q9H4A9 486 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 KCNK4Q9NYG8 393 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 WWOXQ9NZC7 414 aa28.19■■■□□ 2.1
VEGFA-211ENST00000476772 ZFC3H1O60293 1989 aaKnown RBP28.18■■■□□ 2.1
VEGFA-211ENST00000476772 KRT87PA6NCN2 255 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 ARHGEF33A8MVX0 844 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 EBAG9O00559 213 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 E2F3O00716 465 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 PPP6CO00743 305 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 ANXA5P08758 320 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 HIST1H2AGP0C0S8 130 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-211ENST00000476772 HIST1H2ADP20671 130 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 CDKL1Q00532 357 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 SH2D4BQ5SQS7 431 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 TPRG1LQ5T0D9 272 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 CHST15Q7LFX5 561 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-211ENST00000476772 GALNT13Q8IUC8 556 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 MCOLN3Q8TDD5 553 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 TRPC4APQ8TEL6 797 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 HIST1H2AHQ96KK5 128 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 FOPNLQ96NB1 174 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 HIST1H2AJQ99878 128 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 H2AFJQ9BTM1 129 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 TNFRSF12AQ9NP84 129 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 TNPO3Q9Y5L0 923 aaKnown RBP28.18■■■□□ 2.1
VEGFA-211ENST00000476772 HS3ST3A1Q9Y663 406 aa28.18■■■□□ 2.1
VEGFA-211ENST00000476772 PABPN1LA6NDY0 278 aaKnown RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 PRAMEF26H0Y7S4 382 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 PDGFBP01127 241 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 ACP5P13686 325 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 BDKRB1P46663 353 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 CXCL12P48061 93 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 HSPA7P48741 367 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 OR56A4Q8NGH8 313 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 SCARF2Q96GP6 870 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 SIKE1Q9BRV8 207 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 OR52A5Q9H2C5 316 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 SEMA4BQ9NPR2 832 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 INVSQ9Y283 1065 aa28.17■■■□□ 2.1
VEGFA-211ENST00000476772 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-211ENST00000476772 TMEM233B4DJY2 109 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 ZNF195O14628 629 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 CATP04040 527 aaKnown RBP28.16■■■□□ 2.1
VEGFA-211ENST00000476772 ALOX15P16050 662 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-211ENST00000476772 MAPK9P45984 424 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 RPA4Q13156 261 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 PYCR3Q53H96 274 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 CDKL4Q5MAI5 379 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 CWF19L1Q69YN2 538 aaKnown RBP28.16■■■□□ 2.1
VEGFA-211ENST00000476772 ENPP7Q6UWV6 458 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 UBTD2Q8WUN7 234 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 WDR92Q96MX6 357 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 ZBTB26Q9HCK0 441 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 DMTF1Q9Y222 760 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 PRSS38A1L453 326 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 K7ESF4 209 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 MAP4P27816 1152 aaKnown RBP28.16■■■□□ 2.1
VEGFA-211ENST00000476772 GNPDA1P46926 289 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 CCR3P51677 355 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 AP1S2P56377 157 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 NAA20P61599 178 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 SNX19Q92543 992 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 PLCD4Q9BRC7 762 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 TIMM29Q9BSF4 260 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 GPSM3Q9Y4H4 160 aa28.16■■■□□ 2.1
VEGFA-211ENST00000476772 MATN2O00339 956 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 KELP23276 732 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 YPEL5P62699 121 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 SH3BP2P78314 561 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 DMPKQ09013 629 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 LCP2Q13094 533 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 METRNLQ641Q3 311 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 C6orf89Q6UWU4 347 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 SPDYE1Q8NFV5 336 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-211ENST00000476772 OR1E3Q8WZA6 343 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 PDXPQ96GD0 296 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 EBF4Q9BQW3 602 aa28.15■■■□□ 2.1
VEGFA-211ENST00000476772 IER2Q9BTL4 223 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms