RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 FAM45BPQ6NSW5 357 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 RBM44Q6ZP01 1051 aaKnown RBP28.83■■■□□ 2.21
HOXB3-208ENST00000476342 TMPRSS7Q7RTY8 843 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 FAM45AQ8TCE6 357 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 CPNE1Q99829 537 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 TBC1D10AQ9BXI6 508 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 ZMYND15Q9H091 742 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 GALPQ9UBC7 116 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 TRMT6Q9UJA5 497 aaKnown RBP28.83■■■□□ 2.21
HOXB3-208ENST00000476342 CLCA2Q9UQC9 943 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 DHRS7Q9Y394 339 aa28.83■■■□□ 2.21
HOXB3-208ENST00000476342 CXorf49A8MYA2 514 aaPredicted RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 D6RAR5 112 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 CPNE6O95741 557 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 MT-CO3P00414 261 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 SKIV2L2P42285 1042 aaKnown RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 GBX1Q14549 363 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 MAP9Q49MG5 647 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 RBM20Q5T481 1227 aaKnown RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 CDCP2Q5VXM1 449 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 ZC3HC1Q86WB0 502 aaKnown RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 CACTIN-AS1Q8N1I8 211 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 SIDT2Q8NBJ9 832 aaKnown RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 SKA2Q8WVK7 121 aaPredicted RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 ATXN7L3BQ96GX2 97 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 DEPDC7Q96QD5 511 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 TRIT1Q9H3H1 467 aaKnown RBP28.82■■■□□ 2.2
HOXB3-208ENST00000476342 RHOJQ9H4E5 214 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 ANKZF1Q9H8Y5 726 aa28.82■■■□□ 2.2
HOXB3-208ENST00000476342 HYAL3O43820 417 aaPredicted RBP28.81■■■□□ 2.2
HOXB3-208ENST00000476342 PIAS1O75925 651 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 ACSL3O95573 720 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 C1QAP02745 245 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 RPN2P04844 631 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 JUPP14923 745 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 CD9P21926 228 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 TBC1D21Q8IYX1 336 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 PPM1NQ8N819 430 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 ACVR1CQ8NER5 493 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 CD200R1Q8TD46 325 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.81■■■□□ 2.23e-7■■■■■ 68.6
HOXB3-208ENST00000476342 UBXN4Q92575 508 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 INPP5DQ92835 1189 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 FOPNLQ96NB1 174 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 DPYSL5Q9BPU6 564 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 SLC24A2Q9UI40 661 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 VWA7Q9Y334 891 aa28.81■■■□□ 2.2
HOXB3-208ENST00000476342 CASC3O15234 703 aaKnown RBP28.8■■■□□ 2.2
HOXB3-208ENST00000476342 UBXN7O94888 489 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 CD1CP29017 333 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 GP5P40197 560 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 MAPK9P45984 424 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 SQSTM1Q13501 440 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 HECTD2Q5U5R9 776 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 UNC5DQ6UXZ4 953 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 PIM3Q86V86 326 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 PHC3Q8NDX5 983 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 OR5K2Q8NHB8 316 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 GIMAP7Q8NHV1 300 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 CYTH2Q99418 400 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 POLG2Q9UHN1 485 aa28.8■■■□□ 2.2
HOXB3-208ENST00000476342 ATXN7L1Q9ULK2 861 aaPredicted RBP28.8■■■□□ 2.2
HOXB3-208ENST00000476342 ENO3P13929 434 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-208ENST00000476342 AMD1P17707 334 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 CLDN6P56747 220 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 ABRQ12979 859 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 ACSBG2Q5FVE4 666 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 NKAIN2Q5VXU1 208 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 KLHL35Q6PF15 583 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 OR5AR1Q8NGP9 310 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 CFAP61Q8NHU2 1237 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 VPS39Q96JC1 886 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 ELMO2Q96JJ3 720 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 SLC30A3Q99726 388 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 HGH1Q9BTY7 390 aa28.79■■■□□ 2.2
HOXB3-208ENST00000476342 COL27A1Q8IZC6 1860 aaPredicted RBP28.78■■■□□ 2.2
HOXB3-208ENST00000476342 FAM95CA0A1B0GW59 222 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 EIF3FO00303 357 aaPredicted RBP28.78■■■□□ 2.2
HOXB3-208ENST00000476342 KDM1AO60341 852 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 PROS1P07225 676 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 CBSLP0DN79 551 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 CBSP35520 551 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 CDKN2DP55273 166 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 PDAP1Q13442 181 aaKnown RBP28.78■■■□□ 2.2
HOXB3-208ENST00000476342 USP53Q70EK8 1073 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 TRMT10CQ7L0Y3 403 aaKnown RBP28.78■■■□□ 2.2
HOXB3-208ENST00000476342 GSPT2Q8IYD1 628 aaKnown RBP28.78■■■□□ 2.2
HOXB3-208ENST00000476342 DCBLD1Q8N8Z6 715 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 RBBP8Q99708 897 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 MCMBPQ9BTE3 642 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 FUT8Q9BYC5 575 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 ACSS3Q9H6R3 686 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 RDH14Q9HBH5 336 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 KNTC1P50748 2209 aa28.78■■■□□ 2.2
HOXB3-208ENST00000476342 FDXRP22570 491 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 KLHL38Q2WGJ6 581 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 GRTP1Q5TC63 336 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 LRRC8EQ6NSJ5 796 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 NEK10Q6ZWH5 1172 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 NCSTNQ92542 709 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms