RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CCT7Q99832 543 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 MRPS26Q9BYN8 205 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SLC2A11Q9BYW1 496 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PFDN4Q9NQP4 134 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 OPTCQ9UBM4 332 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 B4GALT6Q9UBX8 382 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 POLR3HQ9Y535 204 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 HEMK1Q9Y5R4 338 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 ZFC3H1O60293 1989 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 MOSPD3O75425 235 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SLC2A4P14672 509 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 TYRP14679 529 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CBX2Q14781 532 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 COQ5Q5HYK3 327 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 RALGPS2Q86X27 583 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CBR4Q8N4T8 237 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SKA2Q8WVK7 121 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SCAMP4Q969E2 229 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 ZNF696Q9H7X3 374 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 KLQ9UEF7 1012 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 FAM234BA2RU67 622 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 GRM6O15303 877 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 POP4O95707 220 aaKnown RBP16.31■□□□□ 0.2
TVP23B-202ENST00000476139 C1SP09871 688 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 CREMQ03060 361 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 EMX2Q04743 252 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 LYPLAL1Q5VWZ2 237 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 METTL3Q86U44 580 aaKnown RBP16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ADIPOR2Q86V24 386 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 VRK3Q8IV63 474 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 FAM47BQ8NA70 645 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 TSPAN14Q8NG11 270 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 OR2A12Q8NGT7 310 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 CYB5D2Q8WUJ1 264 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZUFSPQ96AP4 578 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 PPM1MQ96MI6 270 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZSWIM3Q96MP5 696 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 TRIM54Q9BYV2 358 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZIM2Q9NZV7 527 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ACTR3BQ9P1U1 418 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 LEF1Q9UJU2 399 aaPredicted RBP16.31■□□□□ 0.2
TVP23B-202ENST00000476139 DENND4CQ5VZ89 1909 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 DHRS12A0PJE2 317 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 INPP4BO15327 924 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 PABPC1P11940 636 aaKnown RBP16.31■□□□□ 0.2
TVP23B-202ENST00000476139 RPIAP49247 311 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 C11orf91Q3C1V1 193 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 POM121L1PQ3SYA9 428 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZFAND4Q86XD8 727 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
TVP23B-202ENST00000476139 EFHD1Q9BUP0 239 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ZDHHC3Q9NYG2 299 aa16.31■□□□□ 0.2
TVP23B-202ENST00000476139 ANKRD28O15084 1053 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 CALRP27797 417 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 HSPA13P48723 471 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 MRPL19P49406 292 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 BIRC2Q13490 618 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 LY6G5CQ5SRR4 150 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 ZNF697Q5TEC3 545 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SULT1C3Q6IMI6 304 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SERPINA13PQ6UXR4 307 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 IRF7Q92985 503 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 MCCC1Q96RQ3 725 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 HEBP1Q9NRV9 189 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 ARMC1Q9NVT9 282 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SLC25A13Q9UJS0 675 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SCN8AQ9UQD0 1980 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SPINT3P49223 89 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SELPLGQ14242 412 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 CYP51A1Q16850 503 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 DLEU7Q6UYE1 221 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 GPR65Q8IYL9 337 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 PYCR2Q96C36 320 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 HIC2Q96JB3 615 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 KCTD14Q9BQ13 255 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 CPEB1Q9BZB8 566 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 SOX17Q9H6I2 414 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
TVP23B-202ENST00000476139 ARL15Q9NXU5 204 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 PDE10AQ9Y233 779 aa16.3■□□□□ 0.2
TVP23B-202ENST00000476139 RNF103-CHMP3A0A140T963 221 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 K7EPI3 171 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 RHOP08100 348 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 MTPNP58546 118 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 CPSF6Q16630 551 aaKnown RBP eCLIP16.29■□□□□ 0.2
TVP23B-202ENST00000476139 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
TVP23B-202ENST00000476139 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
TVP23B-202ENST00000476139 OLAHQ9NV23 265 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 FAM8A1Q9UBU6 413 aa16.29■□□□□ 0.2
TVP23B-202ENST00000476139 CNOT11Q9UKZ1 510 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms