RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DCLK1O15075 740 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 RGS10O43665 173 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 CDK14O94921 469 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 NPPAP01160 153 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 SLC4A1P02730 911 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF250P15622 560 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 GGT1P19440 569 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 FOXA1P55317 472 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 CD83Q01151 205 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 NKG7Q16617 165 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 RFX4Q33E94 735 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 KANK2Q63ZY3 851 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 JADE1Q6IE81 842 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 NAPEPLDQ6IQ20 393 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 FAM171BQ6P995 826 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TLK2Q86UE8 772 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TMEM192Q8IY95 271 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 MICU2Q8IYU8 434 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 ST13P5Q8NFI4 369 aaPredicted RBP10.4□□□□□ -0.75
ABCF1-205ENST00000475993 OR7D4Q8NG98 312 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TESCQ96BS2 214 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TUBGCP3Q96CW5 907 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 MSANTD3Q96H12 275 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TEX13BQ9BXU2 312 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 TMLHEQ9NVH6 421 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 SMPD4Q9NXE4 827 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 SCN3BQ9NY72 215 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF175Q9Y473 711 aa10.4□□□□□ -0.75
ABCF1-205ENST00000475993 F8W810 466 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 G3V3G9 751 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 AIREO43918 545 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 PGLSO95336 258 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ITGA2P17301 1181 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 NFKB1P19838 968 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 MAGEA11P43364 429 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SNX16P57768 344 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 OLR1P78380 273 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 NFKB2Q00653 900 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 PCID2Q5JVF3 399 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 RBM20Q5T481 1227 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 NRARPQ7Z6K4 114 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 GLB1L3Q8NCI6 653 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SETD9Q8NE22 299 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SIGLEC11Q96RL6 698 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 RHNO1Q9BSD3 238 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 CCNB1IP1Q9NPC3 277 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF302Q9NR11 478 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 RAPGEFL1Q9UHV5 662 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 AGO1Q9UL18 857 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 INVSQ9Y283 1065 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 BTBD3Q9Y2F9 522 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ANKRD12Q6UB98 2062 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 PNMA8CA0A1B0GUJ8 204 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 LOC110117498-PIK3R3F6TDL0 507 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ACKR2O00590 384 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 AZIN1O14977 448 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 FTH1P02794 183 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 LCKP06239 509 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 IL7P13232 177 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 PRKACGP22612 351 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 HSD17B2P37059 387 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SCNN1AP37088 669 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 LIPAP38571 399 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 DCTP40126 519 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SLC15A1P46059 708 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 KCNC1P48547 511 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 CDH13P55290 713 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 FKBP1AP62942 108 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 HERVK_113P63132 956 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 UBE3AQ05086 875 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 GBX1Q14549 363 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 MXD4Q14582 209 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 GRM7Q14831 915 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TARBP2Q15633 366 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SLC14A2Q15849 920 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ESRP1Q6NXG1 681 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 DPY19L3Q6ZPD9 716 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TMEM179BQ7Z7N9 219 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 OR5K1Q8NHB7 308 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 HPDLQ96IR7 371 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ITCHQ96J02 903 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 OPALINQ96PE5 141 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 OR2A14Q96R47 310 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TRAF4Q9BUZ4 470 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ERVK-6Q9BXR3 956 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 ITPAQ9BY32 194 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 RPF1Q9H9Y2 349 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TMPRSS4Q9NRS4 437 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TRMT13Q9NUP7 481 aaKnown RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 FNIP2Q9P278 1114 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 EVLQ9UI08 416 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-205ENST00000475993 TRHDEQ9UKU6 1024 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 PEX16Q9Y5Y5 336 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 HSPE1-MOB4S4R3N1 261 aa10.39□□□□□ -0.75
ABCF1-205ENST00000475993 SSC5DA1L4H1 1573 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms