RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 AFTPHQ6ULP2 937 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 CHST15Q7LFX5 561 aaPredicted RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 STRA8Q7Z7C7 330 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 GALNT7Q86SF2 657 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 SDCCAG8Q86SQ7 713 aaPredicted RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 TRABD2AQ86V40 505 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 SRRM1Q8IYB3 904 aaKnown RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 OTUD6BQ8N6M0 293 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 OR13J1Q8NGT2 312 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 HDAC10Q969S8 669 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 SGSM3Q96HU1 749 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 NUDT22Q9BRQ3 303 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 B3GNT4Q9C0J1 378 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 OR2AG1Q9H205 316 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 RDH14Q9HBH5 336 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 SSU72Q9NP77 194 aaKnown RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 IL26Q9NPH9 171 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 SMYD2Q9NRG4 433 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 VPS9D1Q9Y2B5 631 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 LOXL2Q9Y4K0 774 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 ARL5AQ9Y689 179 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 IGHV5-10-1A0A0J9YXX1 117 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 HGSO14964 777 aaPredicted RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 POLR3GO15318 223 aaPredicted RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 VEGFDO43915 354 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 ACP5P13686 325 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 F3P13726 295 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 HGFP14210 728 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 SLC5A2P31639 672 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 CSF2RBP32927 897 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF140P52738 457 aaPredicted RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 LIMK2P53671 638 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 UCNP55089 124 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 GPLD1P80108 840 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 TRA2AQ13595 282 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 C16orf72Q14CZ0 275 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 AMZ1Q400G9 498 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 AARS2Q5JTZ9 985 aaKnown RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF648Q5T619 568 aaPredicted RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 USP53Q70EK8 1073 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 EXOC3L1Q86VI1 746 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 PHYKPLQ8IUZ5 450 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF547Q8IVP9 402 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 UNC5BQ8IZJ1 945 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 OR4D9Q8NGE8 314 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 GPR150Q8NGU9 434 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 OR4L1Q8NH43 312 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 NAF1Q96HR8 494 aaKnown RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 DNAJC1Q96KC8 554 aaKnown RBP15.32■□□□□ 0.04
CPSF3-203ENST00000475482 RBBP8Q99708 897 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 CMKLR1Q99788 373 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 SLC2A6Q9UGQ3 507 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 KCNK6Q9Y257 313 aa15.32■□□□□ 0.04
CPSF3-203ENST00000475482 OR5K4A6NMS3 321 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 TRIM49D1C9J1S8 452 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 H7C0S8 307 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 GAPDHSO14556 408 aaPredicted RBP15.31■□□□□ 0.04
CPSF3-203ENST00000475482 KLK10O43240 276 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 THRAP10827 490 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 BRAFP15056 766 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 OGNP20774 298 aaKnown RBP15.31■□□□□ 0.04
CPSF3-203ENST00000475482 ETV5P41161 510 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 CLN3Q13286 438 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 FASTKD1Q53R41 847 aaKnown RBP15.31■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF470Q6ECI4 717 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 TIFABQ6ZNK6 161 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 GPR155Q7Z3F1 870 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 C11orf96Q7Z7L8 435 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 CYP4X1Q8N118 509 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 C2CD4AQ8NCU7 369 aaPredicted RBP15.31■□□□□ 0.04
CPSF3-203ENST00000475482 ACMSDQ8TDX5 336 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 CDKN2AIPNLQ96HQ2 116 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 TCF12Q99081 682 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 TTC1Q99614 292 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 RHOJQ9H4E5 214 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 CATSPERZQ9NTU4 200 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 SLC23A2Q9UGH3 650 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 FBXO5Q9UKT4 447 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 CORO1CQ9ULV4 474 aaPredicted RBP15.31■□□□□ 0.04
CPSF3-203ENST00000475482 SDK2Q58EX2 2172 aa15.31■□□□□ 0.04
CPSF3-203ENST00000475482 KIR2DS5A0A0G2JLQ3 304 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 A0A0G2JNG1 304 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TEX51A0A1B0GUA7 166 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 KIR2DS3K7RE56 304 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 CD3EAPO15446 510 aaKnown RBP15.3■□□□□ 0.04
CPSF3-203ENST00000475482 PIAS1O75925 651 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 FAM155BO75949 473 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 SLC4A1P02730 911 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 SLC2A4P14672 509 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF7P17097 686 aaPredicted RBP15.3■□□□□ 0.04
CPSF3-203ENST00000475482 ITIH1P19827 911 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 ARNTP27540 789 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms