RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 NLNQ9BYT8 704 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 CARD9Q9H257 536 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 UCK1Q9HA47 277 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 UBP1Q9NZI7 540 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 PPIL1Q9Y3C6 166 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 CSPG4Q6UVK1 2322 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 ABCA4P78363 2273 aa13.71□□□□□ -0.21
ATG9A-220ENST00000475339 SEC16AO15027 2179 aa13.71□□□□□ -0.22
ATG9A-220ENST00000475339 MAP1AP78559 2803 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 IGHV5-51A0A0C4DH38 117 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 A0A0U1RQS6 177 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 C1orf232A0A0U1RR37 186 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 OR5K4A6NMS3 321 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 DNAJC6O75061 913 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SCRG1O75711 98 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SLC4A1P02730 911 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 KLK3P07288 261 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 MSNP26038 577 aaKnown RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 CD68P34810 354 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 CAPZBP47756 277 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 PPP1CAP62136 330 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 DPTQ07507 201 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 KLF1Q13351 362 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 IHHQ14623 411 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 QPCTQ16769 361 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 BPHLQ86WA6 291 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 TMEM126BQ8IUX1 230 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 AVL9Q8NBF6 648 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 IPMKQ8NFU5 416 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 CCHCR1Q8TD31 782 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SCAMP4Q969E2 229 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 AP2M1Q96CW1 435 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 ZDHHC12Q96GR4 267 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SLC41A2Q96JW4 573 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 PDLIM2Q96JY6 352 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF514Q96K75 400 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SPATA13Q96N96 652 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 FCRL5Q96RD9 977 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 AGAP2Q99490 1192 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 ABCG8Q9H221 673 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 GBA3Q9H227 469 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 KCNF1Q9H3M0 494 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 MCCC2Q9HCC0 563 aa13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
ATG9A-220ENST00000475339 SPTBP11277 2137 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 TMEM200CA6NKL6 621 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 ANKRD66B4E2M5 251 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 MASP2O00187 686 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 JRKO75564 520 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 ANXA9O76027 345 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 NDST3O95803 873 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 PRLP01236 227 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 VIPP01282 170 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 OTX2P32243 289 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 GEMP55040 296 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 WNT3AP56704 352 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 ACY1Q03154 408 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 MPP3Q13368 585 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 HIF1AQ16665 826 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 PLEKHS1Q5SXH7 462 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 PRAMEF17Q5VTA0 474 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 ARHGEF18Q6ZSZ5 1173 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 COX14Q96I36 57 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 PPP1R2P1Q96PQ5 205 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
ATG9A-220ENST00000475339 WDR77Q9BQA1 342 aaPredicted RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 FRMD8P1Q9BZ68 369 aaPredicted RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 R3HDM2Q9Y2K5 976 aaKnown RBP13.69□□□□□ -0.22
ATG9A-220ENST00000475339 TRGV8A0A0C4DH27 118 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 TCRBV7S2A1N4TA0A589 114 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 MEN1O00255 615 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 GRID2O43424 1007 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 KIF5CO60282 957 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CLDN7O95471 211 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CAPN1P07384 714 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
ATG9A-220ENST00000475339 SLC19A1P41440 591 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 KIR3DL1P43629 444 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 TSFMP43897 325 aaKnown RBP13.68□□□□□ -0.22
ATG9A-220ENST00000475339 STC1P52823 247 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CDC16Q13042 620 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 DCAF10Q5QP82 559 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ANKRD20A2Q5SQ80 823 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ANKRD20A1Q5TYW2 823 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ANKRD20A3Q5VUR7 823 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 MRGPREQ86SM8 312 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 RAB43Q86YS6 212 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CEP97Q8IW35 865 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms