RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 UNKQ9C0B0 810 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ILKAPQ9H0C8 392 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 OR2AG1Q9H205 316 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 WDR26Q9H7D7 661 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CD93Q9NPY3 652 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 C11orf16Q9NQ32 467 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 C2orf42Q9NWW7 574 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 WSB2Q9NYS7 404 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 DLGAP2Q9P1A6 1054 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 MUTYHQ9UIF7 546 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ADAMTS6Q9UKP5 1117 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 RNF112Q9ULX5 631 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CA14Q9ULX7 337 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 DMTF1Q9Y222 760 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PCYT1BQ9Y5K3 369 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 USH1CQ9Y6N9 552 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ATXN2Q99700 1313 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 BDP1A6H8Y1 2624 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 LRRK1Q38SD2 2015 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3DA0A087WVF3 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3IA0A087WXS9 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3EA0A087X179 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3KA0A087X1G2 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 CCDC163A0A0D9SF12 145 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3FA6NER0 549 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM202A6NGA9 273 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 OR2AG2A6NM03 316 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3LB9A6J9 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 E2F3O00716 465 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 UBFD1O14562 309 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TNFRSF10CO14798 259 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TAPBPO15533 448 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 GRID2O43424 1007 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 LYPLA1O75608 230 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 POP7O75817 140 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 APBB3O95704 486 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 SEMA4FO95754 770 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FUCA1P04066 466 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PCCBP05166 539 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 CHRNGP07510 517 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3HP0C7X1 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 NEFHP12036 1026 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ITGB6P18564 788 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 HNRNPA2B1P22626 353 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 HNMTP50135 292 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 RPL14P50914 215 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 INHBCP55103 352 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ZXDAP98168 799 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 HSPA14Q0VDF9 509 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TUBB3Q13509 450 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 E2F2Q14209 437 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ZSCAN26Q16670 478 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PHKG1Q16816 387 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ZXDCQ2QGD7 858 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 UGT3A2Q3SY77 523 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 GALNTL6Q49A17 601 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 METRNLQ641Q3 311 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ANKS6Q68DC2 871 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 KIAA0895LQ68EN5 471 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3GQ6DHY5 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 SULT1C3Q6IMI6 304 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3CQ6IPX1 549 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FOXR1Q6PIV2 292 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 EPGNQ6UW88 154 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 KIAA1324Q6UXG2 1013 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 RNF165Q6ZSG1 346 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 DET1Q7L5Y6 550 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 MAVSQ7Z434 540 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 BMP8AQ7Z5Y6 402 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ABI3BPQ7Z7G0 1075 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 LRRTM4Q86VH4 590 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 WDR75Q8IWA0 830 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D3Q8IZP1 549 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 SIX5Q8N196 739 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TCAIMQ8N3R3 496 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF781Q8N8C0 355 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PPP1R14CQ8TAE6 165 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FAM174AQ8TBP5 190 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 CCT6BQ92526 530 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ELMO1Q92556 727 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FOXJ1Q92949 421 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 RHBDF1Q96CC6 855 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PHF21BQ96EK2 531 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 MAELQ96JY0 434 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FAR2Q96K12 515 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PRRX2Q99811 253 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TIMM29Q9BSF4 260 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 APOOQ9BUR5 198 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 FAM107BQ9H098 131 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 MYLK2Q9H1R3 596 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 OR52A5Q9H2C5 316 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 RABEP2Q9H5N1 569 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 COG4Q9H9E3 785 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 TBC1D17Q9HA65 648 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 EBF2Q9HAK2 575 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 PARVBQ9HBI1 364 aa6.47□□□□□ -1.37
ATG4A-207ENST00000474825 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
ATG4A-207ENST00000474825 ZBTB26Q9HCK0 441 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms