RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NOP56O00567 594 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CYR61O00622 381 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 LDLRAD4O15165 306 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 INPPL1O15357 1258 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TBX1O43435 398 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MITFO75030 526 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 F11P03951 625 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 GNAO1P09471 354 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PLA2G4BP0C869 781 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ERCC2P18074 760 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PTX3P26022 381 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 OTX2P32243 289 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CDKN2CP42773 168 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CDC34P49427 236 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SNU13P55769 128 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 HTRA4P83105 476 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PCDH1Q08174 1060 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MED22Q15528 200 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PRICKLE4Q2TBC4 344 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ZC2HC1CQ53FD0 456 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ARHGAP15Q53QZ3 475 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TEX30Q5JUR7 227 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 JADE1Q6IE81 842 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SNRNP48Q6IEG0 339 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SULT1C3Q6IMI6 304 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CDC73Q6P1J9 531 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 VITQ6UXI7 678 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 RIPOR1Q6ZS17 1223 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MTSS1LQ765P7 747 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TRPM8Q7Z2W7 1104 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 VTCN1Q7Z7D3 282 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ITIH5Q86UX2 942 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MCOLN2Q8IZK6 566 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 FBXL16Q8N461 479 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MINDY1Q8N5J2 469 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MB21D1Q8N884 522 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 GLIS1Q8NBF1 620 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NHLRC2Q8NBF2 726 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 C17orf47Q8NEP4 570 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 OR1N1Q8NGS0 311 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 OR6Y1Q8NGX8 325 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 OR2T3Q8NH03 318 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NCOA7Q8NI08 942 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 LRRC20Q8TCA0 184 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PROX1Q92786 737 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MYDGFQ969H8 173 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MGME1Q9BQP7 344 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 LRRC1Q9BTT6 524 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 IDI2Q9BXS1 227 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 WDR11Q9BZH6 1224 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC6A15Q9H2J7 730 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CHRDQ9H2X0 955 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ARMT1Q9H993 441 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ELP3Q9H9T3 547 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NECTIN3Q9NQS3 549 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CHRAC1Q9NRG0 131 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 DBNLQ9UJU6 430 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MAN1B1Q9UKM7 699 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 FBXW2Q9UKT8 454 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CDC14AQ9UNH5 594 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PLEKHA6Q9Y2H5 1048 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PCDHB1Q9Y5F3 818 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF521Q96K83 1311 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NCAPD2Q15021 1401 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PLXNA1Q9UIW2 1896 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 A0A1W2PNR3 127 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 A0A1W2PP55 124 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MTMR11A4FU01 709 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NPIPB15A6NHN6 443 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MYO1GB0I1T2 1018 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 C22orf46C9J442 243 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MYO1FO00160 1098 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SCAMP2O15127 329 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TGFB1I1O43294 461 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 KCNAB3O43448 404 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 MGRN1O60291 552 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SERPINB7O75635 380 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ACTL6BO94805 426 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ANXA1P04083 346 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CYP21A2P08686 494 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CD3GP09693 182 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SRMP19623 302 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PRPS1L1P21108 318 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 DRD5P21918 477 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TUBG1P23258 451 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CD79BP40259 229 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC1A3P43003 542 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CHRNEQ04844 493 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 LRRC63Q05C16 580 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PCLAFQ15004 111 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NTRK3Q16288 839 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 GCNT6Q5T4J0 391 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 KIAA0408Q6ZU52 694 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 GPRIN3Q6ZVF9 776 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SPATA19Q7Z5L4 167 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ANKS1BQ7Z6G8 1248 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC13A5Q86YT5 568 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 APOBEC3FQ8IUX4 373 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 CFAP206Q8IYR0 622 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms