RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GALNT3Q14435 633 aa19.71■□□□□ 0.75
APP-215ENST00000474136 PRKD1Q15139 912 aaPredicted RBP19.71■□□□□ 0.75
APP-215ENST00000474136 GPR19Q15760 415 aa19.71■□□□□ 0.75
APP-215ENST00000474136 PRAMEF17Q5VTA0 474 aa19.71■□□□□ 0.75
APP-215ENST00000474136 AGAP9Q5VTM2 703 aa19.71■□□□□ 0.75
APP-215ENST00000474136 WASH2PQ6VEQ5 465 aa19.71■□□□□ 0.75
APP-215ENST00000474136 ZNF517Q6ZMY9 492 aaPredicted RBP19.71■□□□□ 0.75
APP-215ENST00000474136 RBM12BQ8IXT5 1001 aaKnown RBP19.71■□□□□ 0.75
APP-215ENST00000474136 TTC30BQ8N4P2 665 aa19.71■□□□□ 0.75
APP-215ENST00000474136 C5orf34Q96MH7 638 aa19.71■□□□□ 0.75
APP-215ENST00000474136 RAB17Q9H0T7 212 aa19.71■□□□□ 0.75
APP-215ENST00000474136 ASF1BQ9NVP2 202 aa19.71■□□□□ 0.75
APP-215ENST00000474136 AMACRQ9UHK6 382 aa19.71■□□□□ 0.75
APP-215ENST00000474136 SHOC2Q9UQ13 582 aa19.71■□□□□ 0.75
APP-215ENST00000474136 SLC5A6Q9Y289 635 aa19.71■□□□□ 0.75
APP-215ENST00000474136 NDC80O14777 642 aa19.7■□□□□ 0.74
APP-215ENST00000474136 SCRG1O75711 98 aa19.7■□□□□ 0.74
APP-215ENST00000474136 JCHAINP01591 159 aa19.7■□□□□ 0.74
APP-215ENST00000474136 VARSP26640 1264 aaKnown RBP19.7■□□□□ 0.74
APP-215ENST00000474136 CD86P42081 329 aa19.7■□□□□ 0.74
APP-215ENST00000474136 ARL4DP49703 201 aa19.7■□□□□ 0.74
APP-215ENST00000474136 AP1B1Q10567 949 aa19.7■□□□□ 0.74
APP-215ENST00000474136 PPP1R7Q15435 360 aa19.7■□□□□ 0.74
APP-215ENST00000474136 PLEKHN1Q494U1 663 aaPredicted RBP19.7■□□□□ 0.74
APP-215ENST00000474136 IZUMO3Q5VZ72 239 aa19.7■□□□□ 0.74
APP-215ENST00000474136 TTC27Q6P3X3 843 aa19.7■□□□□ 0.74
APP-215ENST00000474136 C11orf96Q7Z7L8 435 aa19.7■□□□□ 0.74
APP-215ENST00000474136 BPHLQ86WA6 291 aaPredicted RBP19.7■□□□□ 0.74
APP-215ENST00000474136 TMEM126BQ8IUX1 230 aa19.7■□□□□ 0.74
APP-215ENST00000474136 CISD2Q8N5K1 135 aaKnown RBP19.7■□□□□ 0.74
APP-215ENST00000474136 TRAM1L1Q8N609 369 aa19.7■□□□□ 0.74
APP-215ENST00000474136 ENDOVQ8N8Q3 282 aaKnown RBP19.7■□□□□ 0.74
APP-215ENST00000474136 CCDC89Q8N998 374 aa19.7■□□□□ 0.74
APP-215ENST00000474136 RANBP9Q96S59 729 aa19.7■□□□□ 0.74
APP-215ENST00000474136 TMEM121Q9BTD3 319 aa19.7■□□□□ 0.74
APP-215ENST00000474136 ZSCAN5AQ9BUG6 496 aa19.7■□□□□ 0.74
APP-215ENST00000474136 ZFYVE1Q9HBF4 777 aa19.7■□□□□ 0.74
APP-215ENST00000474136 TMPRSS11EQ9UL52 423 aa19.7■□□□□ 0.74
APP-215ENST00000474136 SNX7Q9UNH6 387 aa19.7■□□□□ 0.74
APP-215ENST00000474136 UTP11Q9Y3A2 253 aaKnown RBP19.7■□□□□ 0.74
APP-215ENST00000474136 CDK14O94921 469 aa19.69■□□□□ 0.74
APP-215ENST00000474136 TUBBP07437 444 aa19.69■□□□□ 0.74
APP-215ENST00000474136 KCNJ1P48048 391 aa19.69■□□□□ 0.74
APP-215ENST00000474136 DCDC1P59894 354 aa19.69■□□□□ 0.74
APP-215ENST00000474136 D2HGDHQ8N465 521 aa19.69■□□□□ 0.74
APP-215ENST00000474136 NOA1Q8NC60 698 aaKnown RBP19.69■□□□□ 0.74
APP-215ENST00000474136 FAM118BQ9BPY3 351 aa19.69■□□□□ 0.74
APP-215ENST00000474136 GPR83Q9NYM4 423 aa19.69■□□□□ 0.74
APP-215ENST00000474136 TRHDEQ9UKU6 1024 aa19.69■□□□□ 0.74
APP-215ENST00000474136 C5orf60A6NFR6 353 aa19.68■□□□□ 0.74
APP-215ENST00000474136 KCNN4O15554 427 aa19.68■□□□□ 0.74
APP-215ENST00000474136 P3H1Q32P28 736 aa19.68■□□□□ 0.74
APP-215ENST00000474136 ZRANB3Q5FWF4 1079 aa19.68■□□□□ 0.74
APP-215ENST00000474136 PLEKHS1Q5SXH7 462 aa19.68■□□□□ 0.74
APP-215ENST00000474136 ZBTB2Q8N680 514 aa19.68■□□□□ 0.74
APP-215ENST00000474136 ZNF501Q96CX3 271 aaPredicted RBP19.68■□□□□ 0.74
APP-215ENST00000474136 PHF12Q96QT6 1004 aa19.68■□□□□ 0.74
APP-215ENST00000474136 SMAD5Q99717 465 aaKnown RBP19.68■□□□□ 0.74
APP-215ENST00000474136 UBA6A0AVT1 1052 aaPredicted RBP19.67■□□□□ 0.74
APP-215ENST00000474136 ANKUB1A6NFN9 424 aa19.67■□□□□ 0.74
APP-215ENST00000474136 VEGFDO43915 354 aa19.67■□□□□ 0.74
APP-215ENST00000474136 MCM3P25205 808 aa19.67■□□□□ 0.74
APP-215ENST00000474136 ELAVL4P26378 380 aaKnown RBP19.67■□□□□ 0.74
APP-215ENST00000474136 RBL1P28749 1068 aa19.67■□□□□ 0.74
APP-215ENST00000474136 HSD11B2P80365 405 aa19.67■□□□□ 0.74
APP-215ENST00000474136 TEX35Q5T0J7 233 aa19.67■□□□□ 0.74
APP-215ENST00000474136 FBXO38Q6PIJ6 1188 aa19.67■□□□□ 0.74
APP-215ENST00000474136 TMC3Q7Z5M5 1100 aa19.67■□□□□ 0.74
APP-215ENST00000474136 KMT5CQ86Y97 462 aa19.67■□□□□ 0.74
APP-215ENST00000474136 HPS6Q86YV9 775 aa19.67■□□□□ 0.74
APP-215ENST00000474136 TRAPPC5Q8IUR0 188 aa19.67■□□□□ 0.74
APP-215ENST00000474136 FAM71DQ8N9W8 422 aa19.67■□□□□ 0.74
APP-215ENST00000474136 GLIS1Q8NBF1 620 aa19.67■□□□□ 0.74
APP-215ENST00000474136 PPM1MQ96MI6 270 aa19.67■□□□□ 0.74
APP-215ENST00000474136 PPP1R2P1Q96PQ5 205 aa19.67■□□□□ 0.74
APP-215ENST00000474136 LRRC1Q9BTT6 524 aa19.67■□□□□ 0.74
APP-215ENST00000474136 PAK5Q9P286 719 aa19.67■□□□□ 0.74
APP-215ENST00000474136 TCFL5Q9UL49 500 aa19.67■□□□□ 0.74
APP-215ENST00000474136 G3BP2Q9UN86 482 aaKnown RBP19.67■□□□□ 0.74
APP-215ENST00000474136 PSMD13Q9UNM6 376 aa19.67■□□□□ 0.74
APP-215ENST00000474136 TLCD2A6NGC4 264 aa19.66■□□□□ 0.74
APP-215ENST00000474136 F5H423 210 aaPredicted RBP19.66■□□□□ 0.74
APP-215ENST00000474136 MEN1O00255 615 aa19.66■□□□□ 0.74
APP-215ENST00000474136 TTI1O43156 1089 aa19.66■□□□□ 0.74
APP-215ENST00000474136 RAD51CO43502 376 aa19.66■□□□□ 0.74
APP-215ENST00000474136 KRT14P02533 472 aa19.66■□□□□ 0.74
APP-215ENST00000474136 KLK3P07288 261 aaPredicted RBP19.66■□□□□ 0.74
APP-215ENST00000474136 PRF1P14222 555 aa19.66■□□□□ 0.74
APP-215ENST00000474136 BPIP17213 487 aa19.66■□□□□ 0.74
APP-215ENST00000474136 HALP42357 657 aa19.66■□□□□ 0.74
APP-215ENST00000474136 IFI35P80217 286 aaPredicted RBP19.66■□□□□ 0.74
APP-215ENST00000474136 ATP1A4Q13733 1029 aa19.66■□□□□ 0.74
APP-215ENST00000474136 PTK6Q13882 451 aa19.66■□□□□ 0.74
APP-215ENST00000474136 PLCL1Q15111 1095 aa19.66■□□□□ 0.74
APP-215ENST00000474136 RPE65Q16518 533 aa19.66■□□□□ 0.74
APP-215ENST00000474136 PDPK2PQ6A1A2 396 aa19.66■□□□□ 0.74
APP-215ENST00000474136 IQCKQ8N0W5 287 aa19.66■□□□□ 0.74
APP-215ENST00000474136 BBOF1Q8ND07 529 aa19.66■□□□□ 0.74
APP-215ENST00000474136 MYRIPQ8NFW9 859 aa19.66■□□□□ 0.74
APP-215ENST00000474136 LRRC45Q96CN5 670 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms