RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PAX3P23760 479 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 KCNAB2Q13303 367 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 CRTC3Q6UUV7 619 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 NECAB2Q7Z6G3 386 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 RBM23Q86U06 439 aaKnown RBP20.74■□□□□ 0.91
COL18A1-207ENST00000473212 OR8J3Q8NGG0 315 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 OR6K2Q8NGY2 324 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 LKAAEAR1Q8TD35 194 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 FKBP10Q96AY3 582 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 SLC47A1Q96FL8 570 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 DNAJB9Q9UBS3 223 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 ST14Q9Y5Y6 855 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 GOLGA8CPA6NN73 597 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 INPPL1O15357 1258 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 STX7O15400 261 aaKnown RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CD160O95971 181 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 ALPIP09923 528 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 MAGEA8P43361 318 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 TTPAP49638 278 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 RING1Q06587 406 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CD47Q08722 323 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 SPESP1Q6UW49 350 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 FRA10AC1Q70Z53 315 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 TBCDQ9BTW9 1192 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 NACA2Q9H009 215 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 MAGEH1Q9H213 219 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 GORASP2Q9H8Y8 452 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 FRMPD3Q5JV73 1810 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 BCAS1O75363 584 aaPredicted RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 SERPINB7O75635 380 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 SLC2A4P14672 509 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 HTR1BP28222 390 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 HSPA7P48741 367 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CLCN7P51798 805 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 PPP2R2BQ00005 443 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 HMGCS1Q01581 520 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 MRPL58Q14197 206 aaKnown RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 DPY19L1Q2PZI1 675 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CCSAPQ6IQ19 270 aaPredicted RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 TRAF7Q6Q0C0 670 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 RNF168Q8IYW5 571 aaPredicted RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CLDN19Q8N6F1 224 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 ZNF548Q8NEK5 533 aaPredicted RBP20.73■□□□□ 0.91
COL18A1-207ENST00000473212 ABHD11Q8NFV4 315 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 OR10Q1Q8NGQ4 319 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 CCDC115Q96NT0 180 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 ACTR8Q9H981 624 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 EXD2Q9NVH0 621 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 MARCH5Q9NX47 278 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 VPS9D1Q9Y2B5 631 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 COMMD10Q9Y6G5 202 aa20.73■□□□□ 0.91
COL18A1-207ENST00000473212 PTGES3LE9PB15 166 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 PRKACGP22612 351 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 JAK1P23458 1154 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 OPRL1P41146 370 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 RPL38P63173 70 aaKnown RBP20.72■□□□□ 0.91
COL18A1-207ENST00000473212 ARF5P84085 180 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 TWF1Q12792 350 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 KIAA0040Q15053 153 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 GTDC1Q4AE62 458 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 ATXN7L2Q5T6C5 722 aaPredicted RBP20.72■□□□□ 0.91
COL18A1-207ENST00000473212 LAIR2Q6ISS4 152 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 SBSNQ6UWP8 590 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 PIWIL3Q7Z3Z3 882 aaKnown RBP20.72■□□□□ 0.91
COL18A1-207ENST00000473212 SLC13A3Q8WWT9 602 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 RDH12Q96NR8 316 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 FEM1AQ9BSK4 669 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 TRNAU1APQ9NX07 287 aaKnown RBP20.72■□□□□ 0.91
COL18A1-207ENST00000473212 ELOVL2Q9NXB9 296 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 NUDT4Q9NZJ9 180 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 BAG5Q9UL15 447 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 KDELR3O43731 214 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 B3GALT4O96024 378 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 CYP4F3Q08477 520 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 GTF2H2Q13888 395 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 SPIDRQ14159 915 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 CYP2A13Q16696 494 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 SGO1Q5FBB7 561 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 MFSD14CQ5VZR4 134 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 GTF2H2CQ6P1K8 395 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 SLC16A12Q6ZSM3 486 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 BTLAQ7Z6A9 289 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 TTC30BQ8N4P2 665 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 AADATQ8N5Z0 425 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 TMCO5AQ8N6Q1 288 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 CLHC1Q8NHS4 586 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 KCNJ9Q92806 393 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 FAM162AQ96A26 154 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 NEURL2Q9BR09 285 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 ZFP14Q9HCL3 533 aa20.72■□□□□ 0.91
COL18A1-207ENST00000473212 PAIP2BQ9ULR5 123 aaKnown RBP20.72■□□□□ 0.91
COL18A1-207ENST00000473212 TMEM189-UBE2V1I3L0A0 370 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 IFRD1O00458 451 aaPredicted RBP20.71■□□□□ 0.91
COL18A1-207ENST00000473212 HS6ST1O60243 411 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PRKD3O94806 890 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 RHOCP08134 193 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 ZDHHC11BP0C7U3 371 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PRKCZQ05513 592 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms