RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 HNRNPKP61978 463 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 RALGDSQ12967 914 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 PRKAA1Q13131 559 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 MFAP5Q13361 173 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 COG2Q14746 738 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ZRSR1Q15695 479 aaKnown RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ACCSLQ4AC99 568 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 MDH1BQ5I0G3 518 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 SIRPB2Q5JXA9 342 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 CCNYL2Q5T2Q4 361 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 C6orf163Q5TEZ5 329 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 C9orf139Q6ZV77 190 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 KCTD8Q6ZWB6 473 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ZNF771Q7L3S4 317 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 DGLUCYQ7Z3D6 616 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 TTC30BQ8N4P2 665 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 PI4KAP1Q8N8J0 262 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 OR6J1Q8NGC5 347 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 CD101Q93033 1021 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 VPS33AQ96AX1 596 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 SGK494Q96LW2 274 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ZMAT2Q96NC0 199 aaKnown RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 SEPHS2Q99611 448 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 FNDC11Q9BVV2 318 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 EDEM3Q9BZQ6 932 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ANKRD2Q9GZV1 360 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ARRDC1-AS1Q9H2J1 176 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 OPA3Q9H6K4 179 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 CNOT10Q9H9A5 744 aaKnown RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 APOBEC3GQ9HC16 384 aaKnown RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ZCCHC17Q9NP64 241 aaKnown RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 ACKR4Q9NPB9 350 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 OSER1Q9NX31 292 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 DPP3Q9NY33 737 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 STK26Q9P289 416 aa3.61□□□□□ -1.83
PTCD3-209ENST00000472044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 SPIN1Q9Y657 262 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-209ENST00000472044 C16orf97H3BN30 126 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 CCDC188H7C350 402 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 RECQL5O94762 991 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 F7P08709 466 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 RAB40ALP0C0E4 278 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 ACHEP22303 614 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 CBLP22681 906 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 SLC6A6P31641 620 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 PSMC4P43686 418 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 FMO5P49326 533 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 GAS1P54826 345 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 TFCP2Q12800 502 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 HYAL4Q2M3T9 481 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 VWC2Q2TAL6 325 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 KRBOX4Q5JUW0 171 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 PLA2G4FQ68DD2 849 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 KIAA1161Q6NSJ0 714 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 TMPRSS11FQ6ZWK6 438 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 CENPVQ7Z7K6 275 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 SLFN11Q7Z7L1 901 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 SLC9B2Q86UD5 537 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 NKAIN3Q8N8D7 197 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 MAB21L3Q8N8X9 362 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 RNF128Q8TEB7 428 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 SPDL1Q96EA4 605 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 CTAGE1Q96RT6 745 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 NAA11Q9BSU3 229 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 NUP85Q9BW27 656 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 VN1R1Q9GZP7 353 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 ST6GALNAC4Q9H4F1 302 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 ZBTB20Q9HC78 741 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 TCF7L2Q9NQB0 619 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 ZNF701Q9NV72 531 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-209ENST00000472044 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 KCNG2Q9UJ96 466 aa3.6□□□□□ -1.83
PTCD3-209ENST00000472044 TRIM77I1YAP6 450 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 PRKNO60260 465 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 SLCO2B1O94956 709 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 CELF2O95319 508 aaKnown RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 WDPCPO95876 746 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 CETPP11597 493 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 FGF5P12034 268 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 CKMT2P17540 419 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 AMD1P17707 334 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ERCC2P18074 760 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 THOP1P52888 689 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 MBTD1Q05BQ5 628 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 RBPJQ06330 500 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ZNF672Q499Z4 452 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ERN2Q76MJ5 926 aaKnown RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 CRYBG2Q8N1P7 616 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ZBTB8BQ8NAP8 495 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-209ENST00000472044 Q8NFD4 153 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 OR5M8Q8NGP6 311 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ZFAND2BQ8WV99 257 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 DHX58Q96C10 678 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 EGFL8Q99944 293 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 RETREG1Q9H6L5 497 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 TBC1D17Q9HA65 648 aa3.59□□□□□ -1.83
PTCD3-209ENST00000472044 ABT1Q9ULW3 272 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms