RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 DEFB107AQ8IZN7 70 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 FAM110BQ8TC76 370 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 CLEC4DQ8WXI8 215 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 P2RY11Q96G91 374 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 C12orf42Q96LP6 360 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 TSSK3Q96PN8 268 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 MIPEPQ99797 713 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 CRISPLD1Q9H336 500 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 LRTM1Q9HBL6 345 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 MTX2O75431 263 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 THEGLP0DJG4 465 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 RABIFP47224 123 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 LMAN2Q12907 356 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 GTF2H2Q13888 395 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 EARS2Q5JPH6 523 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 PRAMEF14Q5SWL7 426 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 PRAMEF13Q5VWM6 474 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 GTF2H2CQ6P1K8 395 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 LDB1Q86U70 411 aaPredicted RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 PARP9Q8IXQ6 854 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 GHDCQ8N2G8 530 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 KIF2BQ8N4N8 673 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 TEX19Q8NA77 164 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 PIK3C3Q8NEB9 887 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 PHOSPHO2Q8TCD6 241 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ASB15Q8WXK1 588 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 OR8D2Q9GZM6 311 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 PCDH18Q9HCL0 1135 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 TXNRD2Q9NNW7 524 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 TPRKBQ9Y3C4 175 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 A0A075B6Q4 140 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ERI3O43414 337 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 PAK4O96013 591 aaPredicted RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 HAPLN1P10915 354 aaPredicted RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 CD72P21854 359 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 EPHA4P54764 986 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD47-204ENST00000471694 PRICKLE2Q7Z3G6 844 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ZDHHC13Q8IUH4 622 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 HAS1Q92839 578 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ENY2Q9NPA8 101 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 MKKSQ9NPJ1 570 aaPredicted RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 TAC3Q9UHF0 121 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 MAU2Q9Y6X3 613 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ATRNO75882 1429 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 GRID2O43424 1007 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 POP7O75817 140 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 SCGNO76038 276 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ATP6V1B1P15313 513 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 VIPR2P41587 438 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 STAT5AP42229 794 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 MECP2P51608 486 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 CCZ1BP86790 482 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 CCZ1P86791 482 aaPredicted RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 OLFML2AQ68BL7 652 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 SYVN1Q86TM6 617 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ZNF473Q8WTR7 871 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 BORCS8Q96FH0 119 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ASPNQ9BXN1 380 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 NUDT4Q9NZJ9 180 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 FBXO5Q9UKT4 447 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
CD47-204ENST00000471694 ASTN1O14525 1302 aa8.44□□□□□ -1.06
CD47-204ENST00000471694 A0A1W2PQU0 124 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CDC14CA4D256 554 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 FAM155AB1AL88 458 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 MFSD11O43934 449 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CYP11A1P05108 521 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CHN2P52757 468 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PPP2R2BQ00005 443 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 AKIRIN2Q53H80 203 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DNAJB14Q8TBM8 379 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SLC22A8Q8TCC7 542 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PHOSPHO1Q8TCT1 267 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 RGMAQ96B86 450 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 OR1F2PQ96R84 312 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 SLC25A23Q9BV35 468 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 C6orf62Q9GZU0 229 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 CLEC4MQ9H2X3 399 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 WASF3Q9UPY6 502 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 KPNA4O00629 521 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 CDC123O75794 336 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 OR2B3O76000 313 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 INMTO95050 263 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 AQP1P29972 269 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 ENTPD1P49961 510 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CASP7P55210 303 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DSC1Q08554 894 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SQLEQ14534 574 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TERF2Q15554 542 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TEX44Q53QW1 395 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 GPAT4Q86UL3 456 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 GTPBP3Q969Y2 492 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 SLC35C1Q96A29 364 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 MIEF2Q96C03 454 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms