RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UNC5DQ6UXZ4 953 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 CYHR1Q6ZMK1 362 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 RABEPKQ7Z6M1 372 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 PDZD3Q86UT5 571 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 CRLF3Q8IUI8 442 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 KIRREL3Q8IZU9 778 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 AFAP1L2Q8N4X5 818 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 PTGR2Q8N8N7 351 aaPredicted RBP9.55□□□□□ -0.88
CCM2-204ENST00000470837 ASB11Q8WXH4 323 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 OR1E3Q8WZA6 343 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 PDXPQ96GD0 296 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 SCARF2Q96GP6 870 aaPredicted RBP9.55□□□□□ -0.88
CCM2-204ENST00000470837 ATOH8Q96SQ7 321 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 SLC12A9Q9BXP2 914 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 FAM107BQ9H098 131 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 RDH14Q9HBH5 336 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 EML4Q9HC35 981 aaKnown RBP9.55□□□□□ -0.88
CCM2-204ENST00000470837 TM7SF3Q9NS93 570 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 THAP1Q9NVV9 213 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
CCM2-204ENST00000470837 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 ZSCAN32Q9NX65 697 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 WWOXQ9NZC7 414 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 SIRPGQ9P1W8 387 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 DOLKQ9UPQ8 538 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 ANGPTL3Q9Y5C1 460 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 DGKBQ9Y6T7 804 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
CCM2-204ENST00000470837 COL6A3P12111 3177 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ZNF106Q9H2Y7 1883 aaKnown RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 A0A1B0GTW7 788 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 SRRM3A6NNA2 597 aaPredicted RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 ZNF839A8K0R7 811 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 A8MT66 165 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TARM1B6A8C7 271 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 C10orf142B7Z368 130 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 STX16-NPEPL1H3BU86 382 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 STX16O14662 325 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 SCAMP1O15126 338 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 PSIP1O75475 530 aaKnown RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 SUPT7LO94864 414 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 MATN4O95460 622 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TROVE2P10155 538 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCM2-204ENST00000470837 JUNDP17535 347 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 IMPDH1P20839 514 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 RPL10P27635 214 aaKnown RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 PDHA2P29803 388 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ARL1P40616 181 aaPredicted RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 ACTR1BP42025 376 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 PIK3CGP48736 1102 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 NAGLUP54802 743 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ACTR1AP61163 376 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 HERVK_113P63132 956 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 CDKL1Q00532 357 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ELOCQ15369 112 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ZNF528Q3MIS6 628 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ANKS6Q68DC2 871 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 SLC30A9Q6PML9 568 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 RGS9BPQ6ZS82 235 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TAF8Q7Z7C8 310 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 C11orf96Q7Z7L8 435 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 VRK3Q8IV63 474 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 PHACTR4Q8IZ21 702 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 LILRA3Q8N6C8 439 aaPredicted RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 PHC3Q8NDX5 983 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 DNASE2BQ8WZ79 361 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TFGQ92734 400 aaPredicted RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 CNDP1Q96KN2 507 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 CCDC138Q96M89 665 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 C12orf66Q96MD2 445 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TRMOQ9BU70 441 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 ERVK-6Q9BXR3 956 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 WWP1Q9H0M0 922 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 SLC23A2Q9UGH3 650 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 APOBEC3BQ9UH17 382 aaKnown RBP9.54□□□□□ -0.88
CCM2-204ENST00000470837 LNPEPQ9UIQ6 1025 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 PSMD13Q9UNM6 376 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 CDYLQ9Y232 598 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 STK38LQ9Y2H1 464 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 COLEC10Q9Y6Z7 277 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 TRPM6Q9BX84 2022 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 SCN8AQ9UQD0 1980 aa9.54□□□□□ -0.88
CCM2-204ENST00000470837 NEMP2A6NFY4 417 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 GFYI3L273 518 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 VILLO15195 856 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 NPHS1O60500 1241 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 CCNT2O60583 730 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 SHOX2O60902 331 aaPredicted RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 CRCPO75575 148 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 MLYCDO95822 493 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 FGF3P11487 239 aaPredicted RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 TDGF1P13385 188 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 NDUFS1P28331 727 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 EEF1DP29692 281 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 HSD17B2P37059 387 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 SLC1A6P48664 564 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms