RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	LPGAT1	Q92604	370 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.98	□□□□□ -1.61	2e-10	■□□□□ 9.7
SSB-209	ENST00000470621	JAKMIP2	Q96AA8	810 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	MYADM	Q96S97	322 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	GIMAP4	Q9NUV9	329 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	MRPL15	Q9P015	296 aa	Known RBP	4.98	□□□□□ -1.61
SSB-209	ENST00000470621	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.98	□□□□□ -1.61
SSB-209	ENST00000470621	RPS6KA6	Q9UK32	745 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.98	□□□□□ -1.61
SSB-209	ENST00000470621	SNX8	Q9Y5X2	465 aa		4.98	□□□□□ -1.61
SSB-209	ENST00000470621	MED19	A0JLT2	244 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB-209	ENST00000470621		A6NL46	340 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621		E9PI62	339 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	EDIL3	O43854	480 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	OR10H2	O60403	315 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	PRAMEF11	O60813	436 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	TOMM70	O94826	608 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	CSPG5	O95196	566 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	APOH	P02749	345 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB-209	ENST00000470621	MAP2K2	P36507	400 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	ATP12A	P54707	1039 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	CDH13	P55290	713 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	GNB1	P62873	340 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	CDK3	Q00526	305 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	DMPK	Q09013	629 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	ISCA2	Q86U28	154 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	ZNF595	Q8IYB9	648 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	GUF1	Q8N442	669 aa	Known RBP	4.97	□□□□□ -1.61
SSB-209	ENST00000470621	DNAJC22	Q8N4W6	341 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	AFAP1	Q8N556	730 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	DUX3	Q96PT4	197 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	NEK1	Q96PY6	1258 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	RTP3	Q9BQQ7	232 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	VN1R1	Q9GZP7	353 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	ARRDC1-AS1	Q9H2J1	176 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	MMP27	Q9H306	513 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	SLC35C2	Q9NQQ7	365 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	COQ3	Q9NZJ6	369 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	TUBE1	Q9UJT0	475 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621	SLC7A7	Q9UM01	511 aa		4.97	□□□□□ -1.61
SSB-209	ENST00000470621		A0A1W2PRB8	838 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	HYKK	A2RU49	373 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	GLOD5	A6NK44	160 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	DNM1L	O00429	736 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	CLIC2	O15247	247 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	PCDH7	O60245	1069 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	NGF	P01138	241 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	FRMD6-AS1	P0C7T7	363 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	CHRNB4	P30926	498 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	TPD52	P55327	224 aa	Predicted RBP	4.96	□□□□□ -1.62
SSB-209	ENST00000470621	DCAF10	Q5QP82	559 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	ADAM5	Q6NVV9	412 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	NOTCH2NL	Q7Z3S9	236 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	MINDY1	Q8N5J2	469 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF383	Q8NA42	475 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.96	□□□□□ -1.62
SSB-209	ENST00000470621	APPL2	Q8NEU8	664 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	OR5M8	Q8NGP6	311 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	CTCFL	Q8NI51	663 aa	Predicted RBP	4.96	□□□□□ -1.62
SSB-209	ENST00000470621	GRHL3	Q8TE85	626 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	RNF128	Q8TEB7	428 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	TMCO6	Q96DC7	493 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	LGALS12	Q96DT0	336 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.96	□□□□□ -1.62
SSB-209	ENST00000470621	A4GALT	Q9NPC4	353 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
SSB-209	ENST00000470621	C2CD2	Q9Y426	696 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF541	Q9H0D2	1346 aa		4.96	□□□□□ -1.62
SSB-209	ENST00000470621	ANKUB1	A6NFN9	424 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	MED24	O75448	989 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	ERAL1	O75616	437 aa	Known RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	NADK	O95544	446 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	CAVIN2	O95810	425 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	GNB3	P16520	340 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	B3GALT5-AS1	P59052	145 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	TMEM30B	Q3MIR4	351 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	MDH1B	Q5I0G3	518 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	LINGO4	Q6UY18	593 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	SH2D5	Q6ZV89	423 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	TMPRSS11F	Q6ZWK6	438 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	OR1J1	Q8NGS3	322 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	OR13J1	Q8NGT2	312 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	FGFBP3	Q8TAT2	258 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	RBM4	Q9BWF3	364 aa	Known RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	KLHL4	Q9C0H6	718 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	CRNN	Q9UBG3	495 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	OSGIN1	Q9UJX0	560 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	MTUS1	Q9ULD2	1270 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	KCNJ14	Q9UNX9	436 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	RABGAP1	Q9Y3P9	1069 aa		4.95	□□□□□ -1.62
SSB-209	ENST00000470621	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB-209	ENST00000470621	IGLV9-49	A0A0B4J1Y8	123 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621		A0A0G2JLW4	131 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF197	O14709	1029 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	GJA1	P17302	382 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	ALDH4A1	P30038	563 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	LGALS3BP	Q08380	585 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	BAAT	Q14032	418 aa	Predicted RBP	4.94	□□□□□ -1.62
SSB-209	ENST00000470621	KIAA1644	Q3SXP7	199 aa		4.94	□□□□□ -1.62

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