RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 GRIA1P42261 906 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 LMAN1P49257 510 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 PDE1BQ01064 536 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 PRKG2Q13237 762 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 KRT33BQ14525 404 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 BRD3Q15059 726 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 LACTB2Q53H82 288 aaPredicted RBP13.12□□□□□ -0.31
EFNA1-203ENST00000469878 ZNF789Q5FWF6 425 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 ACVR1CQ8NER5 493 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 OR52K1Q8NGK4 314 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 OR1L3Q8NH93 324 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 LCN9Q8WX39 176 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 CDKN2AIPNLQ96HQ2 116 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 HES6Q96HZ4 224 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
EFNA1-203ENST00000469878 CCM2Q9BSQ5 444 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 SLC2A6Q9UGQ3 507 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
EFNA1-203ENST00000469878 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 PCDHB3Q9Y5E6 796 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 HECTD1Q9ULT8 2610 aa13.12□□□□□ -0.31
EFNA1-203ENST00000469878 CCDC162PA2VCL2 907 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 MROH6A6NGR9 719 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 HCRTR1O43613 425 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 CPNE3O75131 537 aaKnown RBP13.11□□□□□ -0.31
EFNA1-203ENST00000469878 MT-ND3P03897 115 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 TPBGLP0DKB5 382 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 ETS1P14921 441 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
EFNA1-203ENST00000469878 FOXN2P32314 431 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 CETN2P41208 172 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 PMS2P54278 862 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 GPR33Q49SQ1 333 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 GLIS1Q8NBF1 620 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 OR13J1Q8NGT2 312 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 ZFPM2Q8WW38 1151 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 MR1Q95460 341 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 SRMSQ9H3Y6 488 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 TLK1Q9UKI8 766 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 PLAGL1Q9UM63 463 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 ICKQ9UPZ9 632 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
EFNA1-203ENST00000469878 C17orf113A0A1B0GUU1 675 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 KLHL33A6NCF5 533 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
EFNA1-203ENST00000469878 C21orf140B9A014 251 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 TMEM150CB9EJG8 249 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 OR1I1O60431 355 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 RFPL1O75677 317 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 CTSBP07858 339 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 MSNP26038 577 aaKnown RBP13.1□□□□□ -0.31
EFNA1-203ENST00000469878 NDUFS1P28331 727 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PTPN4P29074 926 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 FOXK1P85037 733 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 CACNG1Q06432 222 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PRKAA1Q13131 559 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
EFNA1-203ENST00000469878 SEMA3AQ14563 771 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
EFNA1-203ENST00000469878 DEFB110Q30KQ9 67 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 P3H1Q32P28 736 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PLEKHS1Q5SXH7 462 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ZNF517Q6ZMY9 492 aaPredicted RBP13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ADGRF3Q8IZF5 1079 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 LMNTD1Q8N9Z9 388 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 STYXQ8WUJ0 223 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 FCRL4Q96PJ5 515 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 C19orf43Q9BQ61 176 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PITPNM3Q9BZ71 974 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PCMTD2Q9NV79 361 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ANAPC2Q9UJX6 822 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 NBASA2RRP1 2371 aa13.1□□□□□ -0.31
EFNA1-203ENST00000469878 ARGFXA6NJG6 315 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 IFRD1O00458 451 aaPredicted RBP13.09□□□□□ -0.31
EFNA1-203ENST00000469878 LIASO43766 372 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 IFNB1P01574 187 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 RORAP35398 523 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 PTGIRP43119 386 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
EFNA1-203ENST00000469878 MLLT10P55197 1068 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
EFNA1-203ENST00000469878 ZIC1Q15915 447 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms