RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 UBA6A0AVT1 1052 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 OR5K3A6NET4 321 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 C1QTNF9BB2RNN3 333 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 EIF3FO00303 357 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 MATN2O00339 956 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 IFRD1O00458 451 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 NIPSNAP2O75323 286 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 C1QAP02745 245 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PROS1P07225 676 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ITGA2BP08514 1039 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 GSTA2P09210 222 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 C1QTNF9P0C862 333 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PKMP14618 531 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 HOXB3P14651 431 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ECHS1P30084 290 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 CLCN7P51798 805 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 MPP1Q00013 466 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ILF2Q12905 390 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PDIA2Q13087 525 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 C16orf72Q14CZ0 275 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 HSP90AA5PQ58FG0 334 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZNF789Q5FWF6 425 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PTRHD1Q6GMV3 140 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZNF549Q6P9A3 640 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TRMT10BQ6PF06 316 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 KLHL35Q6PF15 583 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 NEK10Q6ZWH5 1172 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 CYS1Q717R9 158 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 SLC26A11Q86WA9 606 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PLXDC1Q8IUK5 500 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 VRK3Q8IV63 474 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TBC1D21Q8IYX1 336 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 CEP112Q8N8E3 955 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 WDR36Q8NI36 951 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 SNIP1Q8TAD8 396 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZNF592Q92610 1267 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 CCDC74BQ96LY2 380 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 LRRC1Q9BTT6 524 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 MENTQ9BUN1 341 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TBC1D10AQ9BXI6 508 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 SEMA6CQ9H3T2 930 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TFB2MQ9H5Q4 396 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 SYNDIG1Q9H7V2 258 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 SIDT1Q9NXL6 827 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TMEM9Q9P0T7 183 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 FAM8A1Q9UBU6 413 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 PCDHGA7Q9Y5G6 932 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 COLEC10Q9Y6Z7 277 aa8.08□□□□□ -1.12
TRAPPC3-206ENST00000469757 TRBV23OR9-2A0A075B6M9 112 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ESYT3A0FGR9 886 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 PMS2P1A4D2B8 440 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TRABD2BA6NFA1 517 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TLCD2A6NGC4 264 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 IQCF5A8MTL0 148 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 B4E171 279 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 PLD2O14939 933 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZNF500O60304 480 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 BRINP1O60477 761 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 SPAG6O75602 509 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 MATN4O95460 622 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 RPN2P04844 631 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ERVK-10P10266 1014 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ERGP11308 486 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ENO3P13929 434 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 GABRB3P28472 473 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 PKLRP30613 574 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 SHMT2P34897 504 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TSPAN7P41732 249 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 MAPK9P45984 424 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 GFERP55789 205 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ERVPABLB-1P60509 514 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 GABREP78334 506 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TIAL1Q01085 375 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 GUCY2DQ02846 1103 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 MGAT5Q09328 741 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 CTBP1Q13363 440 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TRADDQ15628 312 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TBC1D25Q3MII6 688 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 AMZ1Q400G9 498 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 TEDDM1Q5T9Z0 273 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 NKAIN2Q5VXU1 208 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 RAB11FIP2Q7L804 512 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 OTOAQ7RTW8 1153 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 PROSER1Q86XN7 944 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 KMT5CQ86Y97 462 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 DCUN1D3Q8IWE4 304 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZBED8Q8IZ13 594 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 LSMEM2Q8N112 164 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 KRT222Q8N1A0 295 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 FBXO15Q8NCQ5 510 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 OR5AR1Q8NGP9 310 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 CD200R1Q8TD46 325 aa8.07□□□□□ -1.12
TRAPPC3-206ENST00000469757 ZCCHC14Q8WYQ9 949 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms