RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 hCG_1642624A0A1W2PR95 340 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 MEIOCA2RUB1 952 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CCDC154A6NI56 674 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 METTL15A6NJ78 407 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 H3BS24 57 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 DLGAP1O14490 977 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TGFB1I1O43294 461 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SEC14L5O43304 696 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TBX1O43435 398 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SSX5O60225 188 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 NPHS1O60500 1241 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SOAT2O75908 522 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SLC22A5O76082 557 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 IL18RAPO95256 599 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 VNN1O95497 513 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 EOMESO95936 686 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GOT2P00505 430 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 IFNB1P01574 187 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 S100A8P05109 93 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 HOXD4P09016 255 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 THRBP10828 461 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 HLA-EP13747 358 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TNNI3P19429 210 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CHRM3P20309 590 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CD72P21854 359 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PTBP1P26599 531 aaKnown RBP eCLIP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 HMGCLP35914 325 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GRIA3P42263 894 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 KCNC1P48547 511 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GDI2P50395 445 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 HK3P52790 923 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 NKX2-5P52952 324 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SNAP25P60880 206 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 RAB4BP61018 213 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CAP1Q01518 475 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GABPAQ06546 454 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 LGALS3BPQ08380 585 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GRIK2Q13002 908 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SP140Q13342 867 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 MAB21L1Q13394 359 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ASAH1Q13510 395 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 DAG1Q14118 895 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 EFR3AQ14156 821 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 KCNJ11Q14654 390 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GRM3Q14832 879 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PCLAFQ15004 111 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 KCNMB1Q16558 191 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 BAK1Q16611 211 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TAZQ16635 292 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 BTBD16Q32M84 506 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 MINDY4Q4G0A6 757 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TEX30Q5JUR7 227 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TPRG1LQ5T0D9 272 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ARMC4Q5T2S8 1044 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 N4BP2L1Q5TBK1 243 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 METTL11BQ5VVY1 283 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 STEAP4Q687X5 459 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 XRRA1Q6P2D8 792 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PKN3Q6P5Z2 889 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SLC23A3Q6PIS1 610 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 LRFN4Q6PJG9 635 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PGAP1Q75T13 922 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 FAM214BQ7L5A3 538 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 GDPD3Q7L5L3 318 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 RASAL3Q86YV0 1011 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CPNE9Q8IYJ1 553 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF444Q8N0Y2 327 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 EIF4E3Q8N5X7 224 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 C1orf52Q8N6N3 182 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 C19orf47Q8N9M1 422 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SLC7A14Q8TBB6 771 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SETD7Q8WTS6 366 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 DEPDC1BQ8WUY9 529 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ELMO1Q92556 727 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 COPS5Q92905 334 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 USP13Q92995 863 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 KISS1RQ969F8 398 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SLC38A4Q969I6 547 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 SLCO4A1Q96BD0 722 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 MTERF3Q96E29 417 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PLPPR2Q96GM1 343 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 LIN37Q96GY3 246 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 EXOC2Q96KP1 924 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 TEKT5Q96M29 485 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PWWP2AQ96N64 755 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHB18PQ96TA0 734 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 CSF3RQ99062 836 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 KLF6Q99612 283 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms